| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5310 |
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| Symbol | |
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| ID | 6413011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5731145 |
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| End bp | 5732695 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642715199 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001994271 |
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| Protein GI | 192293666 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCCCG GCCAGTTCGC GAAGACCCGC CCCGACCACC CCGCCTTCAT CATGGCTTCC
ACCGGAGAGA CGGTGAGCTA TGCCGAGCTC GAGGCTCGCA GCAACCGTCT GGCGCATCTG
TTGCGCAATC ACGGCCTGCA GCGGCTCGAC CACTATTCGA TCTTCATGGA GAACAACAAC
CGCTACATCG AGGCGTGCGC AGCCGGCGAG CGCAGCGGCT ATTATTACAC TTGCGTCAAC
TCTTACCTGA CGCCCGCCGA GCTCGCCTAC ATCCTGACCA ACAGCGAATC GCGCGCGCTG
ATCACCTCGA AAGCCAAACT CGACGTCGCC CGCGAAGCGC TGAAGGACTG CCCCAACGTC
ACGCTGTGCG TGGTGGTGGA CGGTGACGGC GAGAGCGATC GGATCGTCGG GCTCGCCGAA
GCGACCAAGA ACCTACCGGA CACGCCGATC GCCGACGAAA GCCTCGGCAC CGCGATGCTG
TATTCGTCCG GCACAACCGG CCGGCCGAAG GGCATCCTGC GCCCGCTGCC GGAGCAGCCG
CCGTCCGAAC CGCTGCCGCT GTTCCACTTC CTCAACATGC TGTGGAAGTA TCGCGACGGC
ATGATCTATT TGTCGCCCGC TCCGCTGTAT CACTCGGCGC CGCAGGCCGC GGTCGGCCTC
ACCATCCGCG ACGGCGGCAC CGTGATCATC ATGGAGCATT TCGATCCGGA GCAGTATCTG
GCCCTGATCG GAAAGCACAA GGTGACGCAC AGCCAGCTCG TACCGACGAT GTTTTCGCGG
ATGCTGAAGC TGCCTGAGGA GGTGCGGAAG GCCTACGATC TGTCGACGCT GGAAGTCGCA
ATCCACGCCG CGGCGCCCTG CCCGCCGCAG GTCAAGGAAC AGATGATCGA ATGGTGGGGA
CCGATCATCC ACGAATACTA CGGCGCCACC GAAGGCCTCG GCTTCACCGC CTGCAACAGC
GCCGAATGGC TGGCGCATCG CGGCACGGTC GGCAAGGTGA TGTTCGGCGA CCTGCATATT
CTCGACGACG GCATGAAGCC GTGCCCGAAG GGCACGCCGG GGCAGATCTG GTTCAAGACC
GCCACGCCGT TCGAGTACTT CAACGACCCG AAGAAGACCC AGGAAGCCCG CTCGGAAGAC
GGCAGCATGA GCACCGTCGG TGACGTCGGC TATGTCGACG ACGATGGCTA TCTGCACCTC
ACCGACCGCG CCACGTTCAT GATCATCTCG GGCGGGGTGA ACATCTATCC GCAGGAGTGC
GAGAACCTGT TGATCACTCA CCCCAAGGTC GCGGATGCCG CTGTGTTCGG CGTGCCCAAC
GAGGATCTCG GCGAGGAGGT CAAGGCGGTG GTGCAGCCGA TGCCGGGCGT CGCCGCCGGC
GCCGACCTCG CCGCCGAACT AATTGCCTTT TGCGCGCAAT CGCTGTCGCG ACAGAAGGTG
CCGCGCTCGA TCGACTTCAT GGACGAATTG CCCCGGCTCC CCACCGGCAA ACTCTACAAG
CGCCTGCTGC GCGACCGCTA TTGGGGGAAC AAGAACAGCC GAATCGTGTG A
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| Protein sequence | MYPGQFAKTR PDHPAFIMAS TGETVSYAEL EARSNRLAHL LRNHGLQRLD HYSIFMENNN
RYIEACAAGE RSGYYYTCVN SYLTPAELAY ILTNSESRAL ITSKAKLDVA REALKDCPNV
TLCVVVDGDG ESDRIVGLAE ATKNLPDTPI ADESLGTAML YSSGTTGRPK GILRPLPEQP
PSEPLPLFHF LNMLWKYRDG MIYLSPAPLY HSAPQAAVGL TIRDGGTVII MEHFDPEQYL
ALIGKHKVTH SQLVPTMFSR MLKLPEEVRK AYDLSTLEVA IHAAAPCPPQ VKEQMIEWWG
PIIHEYYGAT EGLGFTACNS AEWLAHRGTV GKVMFGDLHI LDDGMKPCPK GTPGQIWFKT
ATPFEYFNDP KKTQEARSED GSMSTVGDVG YVDDDGYLHL TDRATFMIIS GGVNIYPQEC
ENLLITHPKV ADAAVFGVPN EDLGEEVKAV VQPMPGVAAG ADLAAELIAF CAQSLSRQKV
PRSIDFMDEL PRLPTGKLYK RLLRDRYWGN KNSRIV
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