Gene Rpal_5307 details

Gene Information

• Locus tag: Rpal_5307
• Symbol: mtnA
• ID: 6413008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 5727383
• End bp: 5728507
• Gene Length: 1125 bp
• Protein Length: 374 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642715196
• Product: methylthioribose-1-phosphate isomerase
• Protein accession: YP_001994268
• Protein GI: 192293663
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
• TIGRFAM ID: [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase; [TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTCG ACGGCAAGCA TACCCGTACG ATCTGGCTCG AGGCTGACGG CTGGACCGTC 
GGCACCATCG ATCAGCGCCG GCTGCCGCAC GACTACGTGG TGGTGAAGCT GACCAGCTCC 
GATGACGCGG CCGATGCGAT CCGCACCATG CTGGTGCGCG GCGCGCCTTT GATCGGGGCA 
ACCGCCGCCT ACGGCATGGC GCTGGCGATG CGCGAGGATG CCTCCGATGC CGGGCTCGAT 
GCCGCCTACG CCAAGCTGGT CGCGACCCGG CCGACCGCCA TCAATCTGAA ATGGGCACTC 
GACGAGATGC GCCGTGCGCT CGCTCCGGTG CAGCCGGGCG ATCGCGTCGC GGCAGCATAT 
CGGCGCGCTG GTGAGATCGC CGACGAAGAC GTCGCGATCA ATCAGGCGAT CGGCGCCAGC 
GGCCTGAGGC TGATCGAGGC GATTGCGGCG ACCAAAAAGC CTGGCGAGCG GGTCAACGTG 
CTGACCCATT GCAACGCCGG CTGGCTCGCC ACCGTCGATT GGGGCACCGC GACCGCGCCG 
ATCTATCAGG CGTTCGATGC CGGTATTCCG ATCCATGTGT ATGCCGACGA GACCCGCCCG 
CGTAACCAGG GCGCGTCGCT GACCGCCTGG GAGCTGGGCC ATCACGGCGT CGACCACACC 
GTGATTCCGG ACAATACCGG CGGTCATCTG ATGCAGCATG GCTTGGTCGA TATCGTCATC 
GTCGGCACCG ACCGCGTCAC CGCCGACGGC GATGTCTGCA ACAAGATCGG CACCTATCTG 
AAAGCGCTGG CGGCTGCCGA CAACAAGGTG CCATTTTACG TCGCGCTGCC GTCGCCGACG 
ATCGACTTCA CCATCCACGA CGGCGTCCGC GAAATCCCAA TCGAGCAGCG CGAAGCCGCC 
GAGGTCACCG ACATGACTGG TCGTACCAAT GATGGTCGGA TCGAGACGGT GCGGATCGTG 
CCGCAGGGAT CCAAGGTCGC TAATTACGGC TTCGACGTCA CCCCGGCACG CCTCGTTACC 
GGCCTGATCA CCGAGCGCGG GGTGCTGAAA GCCGATCGCG CCGCGCTGGC CGCGGCCTTT 
CCGGAGCGGG TGGCCCAGGC CAAGGAACTC CTGCGGGCGT CCTGA 

 

Protein sequence

MKVDGKHTRT IWLEADGWTV GTIDQRRLPH DYVVVKLTSS DDAADAIRTM LVRGAPLIGA 
TAAYGMALAM REDASDAGLD AAYAKLVATR PTAINLKWAL DEMRRALAPV QPGDRVAAAY 
RRAGEIADED VAINQAIGAS GLRLIEAIAA TKKPGERVNV LTHCNAGWLA TVDWGTATAP 
IYQAFDAGIP IHVYADETRP RNQGASLTAW ELGHHGVDHT VIPDNTGGHL MQHGLVDIVI 
VGTDRVTADG DVCNKIGTYL KALAAADNKV PFYVALPSPT IDFTIHDGVR EIPIEQREAA 
EVTDMTGRTN DGRIETVRIV PQGSKVANYG FDVTPARLVT GLITERGVLK ADRAALAAAF 
PERVAQAKEL LRAS