| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5295 |
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| Symbol | |
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| ID | 6412996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5712919 |
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| End bp | 5714205 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715184 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001994256 |
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| Protein GI | 192293651 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGCGC AGCCCACGCC GCAAGGTGCC TGGAGGATCA CCTTCCTGCT GTTTCTATTC
ATGGTGGTCA ACTTCGCCGA CAAGATTGTC GTAGGCCTGG CCGGCGTGCC GATCATGCAG
GAGCTGAAGC TCTCGCCCGA ACAATTCGGT CTGCTCGGCT CGTCGTTCTT CTTCCTGTTC
TCGATCACCG CGATCGTGGT CGGCTTCATC GTCAATCGGG TTGAGACCAG ATGGGTGCTG
TTGGCGCTGG CGCTGGTGTG GGCGGTGGCG CAGTTTCCGA TGGTCGGCGA GGTCTCCTTC
GCCACCTTCG TGATCTGCCG CATCATTCTC GGCGCCGGCG AAGGGCCAGC GTTCTCGGTC
GCAGCGCATG CGATCTACAA GTGGTTTCCG GATCATCAGC GCACGCTGCC GACCGCGATC
CTGTCGCAGG GCTCGGCGTT CGGTGTGATC CTGGCGGTGC CGGCGCTGAA CTGGATCATC
GTCAATCACT CCTGGCACTA CGCCTTCGCG GCGCTCGGCA TCGTCGGGCT GATGTGGGCG
GTGGCGTGGC TCGCGCTCGG CAAAGAGGGG CCGCTGGTGC CGAGCCCCGC GGCGGCCGCC
GCCGAGGTGC GGATTCCTTA CGTGCGGCTG CTGACCTCGC GCACTTTCAT TGGCTGCGTG
CTGGCAACAT TCGGTGCCTA TTGGGCGCTG TCGCTCGGGC TGACCTGGTT TACCACCTTC
ATCGTGCAGG GGCTGGGCTT CAGCCAGCAC CAGGCCGGGC TGGTCTCGAT CACGCCGTGG
GTGTTCGGCG CCTGCGTGGT GCTGTTCACC GGCTGGCTGT CGCAGCGGCT GATGCAGCGC
GGCGTCTCCA GCCGGATGGC GCGCGGCGTG CTCGGTGCGG CGCCACTCTT GGTCGGCGGC
GCCATCATCC TGATGCTGCC CTATATCGAC AGTCCCACCG CACGGATCGT CGCCCTGGTG
GTCGGCTCCG GCCTGTGCGG CTCGATCTAC GTGGTGTGTC CGCCGATGAT CGCCGAGTTC
GCTCCGGTGT CGCAGCGCGG CGCCGCGATC GCGATCTACG GCGCGCTGTA TACGCTGGCG
GGGATCATCG CACCGTGGGT GATGGGCAGC GTACTGCAGC ACTCAGCCTC GCTGCTTCAC
GGTTACATCG TCGGCTACGC CATCAACGGC GCCGTGATGA TCGTTTCGGG TGTCGCCGGC
CTGTTGCTGC TGTGGCCGAA CACCGAGCGG GCACGGCTGT TGCGGAGCGC GGAGCCGGTG
TCACTGGGAC TGCGCAAGCC GGCCTAA
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| Protein sequence | MIAQPTPQGA WRITFLLFLF MVVNFADKIV VGLAGVPIMQ ELKLSPEQFG LLGSSFFFLF
SITAIVVGFI VNRVETRWVL LALALVWAVA QFPMVGEVSF ATFVICRIIL GAGEGPAFSV
AAHAIYKWFP DHQRTLPTAI LSQGSAFGVI LAVPALNWII VNHSWHYAFA ALGIVGLMWA
VAWLALGKEG PLVPSPAAAA AEVRIPYVRL LTSRTFIGCV LATFGAYWAL SLGLTWFTTF
IVQGLGFSQH QAGLVSITPW VFGACVVLFT GWLSQRLMQR GVSSRMARGV LGAAPLLVGG
AIILMLPYID SPTARIVALV VGSGLCGSIY VVCPPMIAEF APVSQRGAAI AIYGALYTLA
GIIAPWVMGS VLQHSASLLH GYIVGYAING AVMIVSGVAG LLLLWPNTER ARLLRSAEPV
SLGLRKPA
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