Gene Rpal_5289 details

Gene Information

• Locus tag: Rpal_5289
• ID: 6412990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 5706044
• End bp: 5706760
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 642715179
• Product: protein of unknown function DUF938
• Protein accession: YP_001994251
• Protein GI: 192293646

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.486513
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAGT TCGTGGTGGA GTTCGGCAAG GACGGGCGGC GGGTCGAACC CGACGGCCGG 
CTCGACGCTG CCGCGTTTCA TCGCAATGAC GAGCCGATCC GCGCCATGCT GGCCCGGCTG 
CTCGCCGGCC GGCAGGGTGA CGTGCTCGAA GCGGGCAGCG GCACCGGCCA GCACATCGCA 
GCGCTGGCGC GCGAACATCC GGACATCGCG TGGTGGCCGA GCGACGTCAA CGACCTGCAC 
CTCAAGAGCA TCGCCGCCTG GTGCGCCCAT GCCGGACTGC CCAATCTGCG GTCGCCGCAG 
CGGATCGACT TGGCCGATCC CGCCTGGTCG GTCGCACCGG CCGACCGGGC GGCGCCCGGG 
CCGCTGCTGG CGATATTCTG TGCCAACGTT GTCCATATCG CGCCGTGGCG CGTTGCCGAA 
GGCCTCTTGG CCGGTGCCGG ACGGCTGCTG CGCCAGGACG GCATGCTGGT TCTGTATGGA 
CCGTTCAAGC AGGACGGCAA GCACACCGCG CTCAGCAATG CGGTGTTCGA CACCAGCCTG 
CGCGACGCCA ATCCGGAATG GGGCGTGCGC GACGTGGCGG ATCTGGAACG GCTCGCGGCC 
GGCGCCGGTC TGGCGCTGAG CGAGATCGTC GAGATGCCGG CCAACAACCT GATCCTGGTG 
TTTGTACGGG CGAAACCGGC GGGGGCCCAT GCGGCAGCCG GTGGCGCGGC GGGTTGA 

 

Protein sequence

MAEFVVEFGK DGRRVEPDGR LDAAAFHRND EPIRAMLARL LAGRQGDVLE AGSGTGQHIA 
ALAREHPDIA WWPSDVNDLH LKSIAAWCAH AGLPNLRSPQ RIDLADPAWS VAPADRAAPG 
PLLAIFCANV VHIAPWRVAE GLLAGAGRLL RQDGMLVLYG PFKQDGKHTA LSNAVFDTSL 
RDANPEWGVR DVADLERLAA GAGLALSEIV EMPANNLILV FVRAKPAGAH AAAGGAAG