| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5283 |
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| Symbol | |
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| ID | 6412984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5698729 |
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| End bp | 5699763 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642715173 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_001994245 |
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| Protein GI | 192293640 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.19279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAC GGACGTTTCG AACCGGGCTT GCAATCGGGC TCGTGGTCGC GGCGGGCATC
GCGGCGGCGG CGATCACCTA TGAGCGCTAC GACACCAAGA CGCTGAAGCG CACCATTCGC
CGCGATGCCG TATTGTGCGG CGTCAACAAG GGCCTGCCCG GGTTCTCGAC GCCGGACGAC
AAGGGCAACT GGACCGGCTT CGACGTCGAT TTCTGCCGCG CGGTGGCGGC GGCGATCTTC
GACGATCCGA CCAAGGTGCA GTTCGTGCCG CTCGATGCCA ACGAGCGCTT CAAGGAACTG
CAGAGCCGCA AGGTCGACAT CCTGTCGCGC AACTCGACCT GGAGCATGTC GCGCGAAACC
AATTACGATC TGTATTTCCC GGCGGTCGCC TATTACGACG GCCAGGGCTT CATGGTGCCG
GCCTCGCGCA AGATCGACAG CGCTGTCGAG CTCGACGGCA GCAAGGTCTG CGTCCAGAAC
GGCACCACCA CCCAGCTCAA CCTCGCCGAT TACTTCCGTA CCAACAACAT GAAGTATCAG
GAGGTGAAGT CGGAGAAATT CGACGACGTG GTGAAGGCCT ACAAGGACGG CCAGTGCGAC
ACCTTCACGG CCGACGTGTC GCAGCTCTAC GCGCTGCGCA AGACCTTCGA GAAGTCCGGC
GACCACATCA TCCTGCCCGA CGTTATTTCC AAGGAGCCGC TCGCACCGGT GGTCCGCCAG
CGCGACGACG ACTGGATGAT GATCGTGAAG TGGACGCTGT ACGCGATGAT CAACGCCGAA
GAGCTGGGCA TCACCTCGCA GAACATCGGC GAAGCGCTGA AGTCGAAGAA ACCGGATGTG
ATGCGCCTGG TCGGCACCGA AGGTGCGTTC GGCGAGGATC TCGGCCTGTC GAAGGACTGG
GCCGCTCGCG TCATCCGCCA CGTCGGCAAT TACGGCGAAG TCTACGACCG CAACGTCGGC
AAACTCGGCA TCCCGCGCGG CCTGAACCAG CTCTGGAGCA ACGGCGGCAT CCAGTACGCC
CCGCCGATCA GGTAG
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| Protein sequence | MFKRTFRTGL AIGLVVAAGI AAAAITYERY DTKTLKRTIR RDAVLCGVNK GLPGFSTPDD
KGNWTGFDVD FCRAVAAAIF DDPTKVQFVP LDANERFKEL QSRKVDILSR NSTWSMSRET
NYDLYFPAVA YYDGQGFMVP ASRKIDSAVE LDGSKVCVQN GTTTQLNLAD YFRTNNMKYQ
EVKSEKFDDV VKAYKDGQCD TFTADVSQLY ALRKTFEKSG DHIILPDVIS KEPLAPVVRQ
RDDDWMMIVK WTLYAMINAE ELGITSQNIG EALKSKKPDV MRLVGTEGAF GEDLGLSKDW
AARVIRHVGN YGEVYDRNVG KLGIPRGLNQ LWSNGGIQYA PPIR
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