| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5250 |
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| Symbol | |
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| ID | 6412951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5661798 |
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| End bp | 5662904 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715140 |
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| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
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| Protein accession | YP_001994212 |
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| Protein GI | 192293607 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGTTCA CCCTGCCGCC CGACGCCAAC GGAATTCTGC CCGACCGCAT GATCGCGGCG
ATGACGGAAT CGGGCTTGAT CCTGCCGGAC TATCCGTTCG TCGAGAGCCA GATCCAGCCG
GCCAGCCTCG ACCTGCGGCT GGGGCCGATC GCCTACCGGG TGCGCGCCAG CTTCCTGCCG
GGGCCGGACT GCACCGTGGC CGAGCGGATC GACGAGCTGA AGCTGCACGA GATCGACCTG
TCGGACGGTG CCGTGCTGGA GACCAACTGC GTCTATATCG TGCCGCTGCT CGAAAGCCTG
GCGATGCCGC GCCACATCGT GGCGGCCGCC AATCCGAAAA GCTCGACCGG CCGGCTCGAC
GTGTTCACCC GGGTGATCGC CGACGGCACC CGCCGCTTCG ACATGATCGG CGCCGGCTAT
CACGGCCCGC TGTATGCCGA GATCAGCCCG AAGACCTTCC CGGTGCTGCT GCGCGAAGGC
TCGCGGCTGT CACAGGTACG CTTCCGCGTC GGCCAGGCCA CGCTGGAGCA GGACGAACTC
GATACGCTGC ACGATGCAGA GCGGCTGGTC GATGCCGACG ACGCCGACCT CACCGGCGGC
GTCGCTCTCA GCGTCGATCT GTCGGGCGAG AATTCCGAGG GCTTCGTCGG CTATCGCGCC
AAGCGCCACA CCGGCGTCGT CGATATCGAC CGCCGCGGCG GCTATGCGGT CGGCGAGTTC
TGGGAGCCGA TCGCTGCCCG CCCGGACGGC ACGCTGATCC TCGATCCCGG CGAGTTCTAC
ATTCTGGCGT CGAAGGAAGC CGTGCAGGTA CCGCCGGACT ACGCCGCCGA GATGGTGCCG
TTCGATCCTT TGGTCGGCGA ATTCCGCGTC CACTATGCGG GTTTCTTCGA TCCCGGCTTC
GGCTACGAAG GCGCCGGCGG CTCGGGCGCC CGCGCGGTGC TGGAAGTGCG CTCGCGCGAA
GTGCCGTTCA TCCTCGAGCA CGGCCAGATC GTCGGCCGCC TGATCTACGA AAAGATGCTG
TCGCGCCCCG ACGCGATGTA CGGCCAGCGC ATCGGCTCGA ACTACCAGGC CCAGGGCCTG
AAGCTGAGCA AGCATTTCAA GGTGTAA
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| Protein sequence | MPFTLPPDAN GILPDRMIAA MTESGLILPD YPFVESQIQP ASLDLRLGPI AYRVRASFLP
GPDCTVAERI DELKLHEIDL SDGAVLETNC VYIVPLLESL AMPRHIVAAA NPKSSTGRLD
VFTRVIADGT RRFDMIGAGY HGPLYAEISP KTFPVLLREG SRLSQVRFRV GQATLEQDEL
DTLHDAERLV DADDADLTGG VALSVDLSGE NSEGFVGYRA KRHTGVVDID RRGGYAVGEF
WEPIAARPDG TLILDPGEFY ILASKEAVQV PPDYAAEMVP FDPLVGEFRV HYAGFFDPGF
GYEGAGGSGA RAVLEVRSRE VPFILEHGQI VGRLIYEKML SRPDAMYGQR IGSNYQAQGL
KLSKHFKV
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