| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5239 |
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| Symbol | |
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| ID | 6412939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5649440 |
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| End bp | 5649883 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715129 |
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| Product | nickel responsive regulator |
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| Protein accession | YP_001994202 |
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| Protein GI | 192293597 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGCG TCACCATCAC GCTCGACGAC GACCTGATGG AAAAGCTCGA CGCGATCATC
GCGGCGCGCG GCTACCAGAA CCGCTCCGAG GCGATCCGCG ACCTGGCGCG GATCGGCATC
CAGCAGACCG CGGCGGAGAC CACCAGCGGG CATTGCGTCG GCGCGATGGT CTATACGTAC
GATCACTCCA AGCGCGACCT GCCGCGCAAG CTGACGCAGA GCTTCCACCA TCACCACGAT
CTGTCGCGCG CCACGATGCA CGTGCATCTC GACCACGATC AGTGCCTGGA AGTGACGATC
CTCGACGGCA ACGCCAGCGA GCTGCAGCAC TTCGCCGACC ACATCTTCGC CGAACGCGGC
GTTCGCTACG GAAGGTTGGT GACGATCCCG GCCGAGCCGC CTGAGGCGCA CGAGCATCAT
CACGAGCACG ACGCATCATC CTGA
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| Protein sequence | MHRVTITLDD DLMEKLDAII AARGYQNRSE AIRDLARIGI QQTAAETTSG HCVGAMVYTY
DHSKRDLPRK LTQSFHHHHD LSRATMHVHL DHDQCLEVTI LDGNASELQH FADHIFAERG
VRYGRLVTIP AEPPEAHEHH HEHDASS
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