| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5212 |
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| Symbol | |
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| ID | 6412912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5623522 |
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| End bp | 5625141 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715102 |
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| Product | ABC transporter related |
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| Protein accession | YP_001994175 |
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| Protein GI | 192293570 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTC TCGACAACAT CTCCAAGCAG AATGGCCACC AGATCCTCTA CATCGAAGCC
TCCGCAACGC TGCTGCGGGG CGAGAAGATC GGGCTGGTCG GGCCGAACGG CTCCGGCAAG
ACCACGCTGT TCCGGATGAT CACCGGCCAG GAACAGCCGG ACGAAGGCCA AGTGTCGGTC
GATCGCGGCC TGACCATCGG CTATTTCAGT CAGGACGTCG GCGAGATGAG CGGCCGCAGC
GCGGTCGCCG AGACCATGGA GGGCGCCGGC CCGGTCAGCG AAGTCGCGGC CGAGCTGAAG
GAGCTGGAGC ACGCGCTGGC CGATCCAGAC CGCGCCGACG AGATGGAACA GATCCTCGAA
CGCTACGGCG AGGTGCAGCA CCGCTTCGAG GAACTTGACG GCTACGCGCT GGAAGGCCGC
GCCCGCGAGG TGCTGGCCGG CCTGTCGTTC AGCCAGGAGA TGATGGACGG CGACGTCGGC
AATCTGTCGG GCGGCTGGAA GATGCGCGTG GCGCTGGCCC GCATCCTGTT GATGCGGCCC
GACGTGATGC TGCTCGACGA ACCGTCGAAC CATCTCGACA TCGAAAGCCT GATCTGGCTG
GAGCAGTTCC TCAAGGGCTT CGAGGGGGCG CTGCTGATGA CCTCGCACGA CCGCGCCTTC
ATGAACCGCA TCGTCAACAA GATCGTCGAG ATCGATGCCG GCACGCTGAC CAGCTACACC
GGCGACTACG AATTCTATGA GGGCCAGCGC GCGCTCGCCG ACAAGCAGCA GCAGGCGCAG
TTCGAACGGC AGCAGGCGAT GCTGGCCAAG GAAGTGGCGT TCATCGAGCG CTTCAAGGCG
CGCGCCTCGC ACGCCGCCCA AGTGCAGAGC CGGGTCAAGA AGCTGGAGAA GATTGAGAAG
GTCGAGCCGC CGCGCCGCCG CCAGATCATC GCGTTCGACT TCCTGCCGGC GCCGCGCTCG
GGCGAAGACG TCGCCAGCCT CAGCCATGTC CGCAAGGCCT ACGGCAATCA CGTCATCTAT
GAGGATCTCG ATTTCGCGAT CCGCCGCCGC GAGCGCTGGT GCGTGATGGG CATCAACGGC
GCCGGCAAAT CGACGCTGCT CAAGCTGGTC GCTGGCGCCA CCGCGCCCGA CGACGGCAGC
GTGACGATCG GCGGCAGCGT CAAGATGGGT TACTTCGCCC AGCACGCGAT GGACCTGATC
GACGGCGAAC TCACCGTGTT CCAGTCGCTG GAAGAATGGT TTCCGCAGGC CGGCCAGGGC
TCACTCCGCG CGCTCGCCGG CTGCTTCGGC TTCTCCGGCG ACGACGTCGA GAAGCGCTGC
CGGGTGCTGT CCGGCGGCGA GAAGGCCCGG CTGGTGATGG CCAAGATGCT GTACGACCCG
CCGAACTTCC TGGTGCTCGA CGAGCCGACC AACCACCTCG ACATCGCCAC CAAGGAAATG
CTGATCAAGG CGCTCGCCGA TTTCGAAGGC ACCATGCTGT TCGTCTCGCA CGACCGCCAC
TTCCTGGCCG CGCTGTCGAA CCGGGTGCTG GAGCTGACCC CCGAAGGCGT CCACAAATAC
GGCGGCGGCT ACACCGAATA CGTCGCCCGC ACCGGCCACG AGGCGCCGGG GCTGCATTGA
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| Protein sequence | MIRLDNISKQ NGHQILYIEA SATLLRGEKI GLVGPNGSGK TTLFRMITGQ EQPDEGQVSV
DRGLTIGYFS QDVGEMSGRS AVAETMEGAG PVSEVAAELK ELEHALADPD RADEMEQILE
RYGEVQHRFE ELDGYALEGR AREVLAGLSF SQEMMDGDVG NLSGGWKMRV ALARILLMRP
DVMLLDEPSN HLDIESLIWL EQFLKGFEGA LLMTSHDRAF MNRIVNKIVE IDAGTLTSYT
GDYEFYEGQR ALADKQQQAQ FERQQAMLAK EVAFIERFKA RASHAAQVQS RVKKLEKIEK
VEPPRRRQII AFDFLPAPRS GEDVASLSHV RKAYGNHVIY EDLDFAIRRR ERWCVMGING
AGKSTLLKLV AGATAPDDGS VTIGGSVKMG YFAQHAMDLI DGELTVFQSL EEWFPQAGQG
SLRALAGCFG FSGDDVEKRC RVLSGGEKAR LVMAKMLYDP PNFLVLDEPT NHLDIATKEM
LIKALADFEG TMLFVSHDRH FLAALSNRVL ELTPEGVHKY GGGYTEYVAR TGHEAPGLH
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