| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5208 |
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| Symbol | |
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| ID | 6412908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5617466 |
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| End bp | 5620012 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715098 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001994171 |
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| Protein GI | 192293566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGTGG TCTCATCCGC TTGGAATGGT CACTTGCCCG TGCAGTCGCT ACCAGAAAAA
AGTTCCTCCC AGTCGGCGCC TCTGGATGAG CTGGCGCTCG CGGAGATCAA GAGCGCAATC
CTCGCCAAGC TGACGCTGGC GATCGGCAAG GAAGCCGCGC ACGCGACCAA GCACGACTGG
TACAAGGCCT CCGCCTTGGC GCTGCGTGAC CGGATCGTGC ACCGCTGGCT GGTGTCCGAG
AAGGAGAGCT ACGACGCCGG TCGCAAGCGG GTGTATTACC TGTCGCTCGA GTTCCTGATC
GGCCGGCTGT TCACCGACTC GCTGAACAAT ATGGGCCTGC TGGCGCAGTT TGACGCCGCG
CTCGGCGACC TCGGCGTCGG CCTCAACGAC CTGCGCAAAT GCGAACCCGA CGCAGCGCTC
GGCAATGGCG GCCTCGGCCG CCTCGCCGCC TGCTTCATGG AGAGCATGGC GACGCTGGAG
ATCCCGGCCT ACGGCTACGG CATCCGCTAC GATTACGGCC TGTTCCGCCA GATCATCAAT
CACGGCTGGC AGCAGGAATT CCCCGACGAG TGGCTGTCGT TCGGGAACCC ATGGGAATTG
CAGCGGCCGG AGGTGGTGTA TCAGGTCAAG TTCGGCGGCC ATGTCGACCA GATCACCGAC
GCCAAGGGCT ATACCCGCGC GGTGTGGACG CCGGGCGAGA CGGTGCAGGC GATCGCCTAC
GACACCCCGA TCGTCGGCTG GCGCGGCGAG CACGTCAATG CGCTGCGGCT ATGGTCGGCG
CGCGCGCCGG ATCCGCTCTT GATCGACGTG TTCAACACCG GCGACTATCT CGGCGCCACC
GCGCACGAGG CGCGCGCCGA AGCGATCTGC AAGTTCCTGT ATCCGAACGA CGAGAGCCCG
GCAGGCCGCG AGCTGCGGCT GCGCCAGGAA TACTTCTTCG TCTCCGCCTC GCTGCAGGAC
CTGATCAAGC GGCACCTGGA TTCCGACGGC CAGATCCGCA ACCTCGCCAA GAAGGCGGCG
ATCCAGCTCA ACGACACCCA TCCATCGCTG GCGGTCGCCG AGCTGATGCG GCTCCTGGTC
GACGTTCACG GCCTGCGCTG GGACGACGCC TGGCAGATCA CCGTCGCGAC GCTGAGCTAC
ACCAACCATA CGCTGCTGCC CGAAGCGCTG GAGACCTGGC CGCTCGACCT GTTCCAGCGC
ACGCTGCCGC GCCACCTCGA AATCATCTAC CGGATCAACG AGGTGCATCT CGGCCTCGCC
GAGGCGCGCA GCCCCGGCGA TATCGAATTC CGCGCCTCGG TGTCGCTGAT CGACGAGAAG
GCCGGCCGCC GGGTGCGGAT GGGCCACCTC GCCTTCATCG GCTCGCACCG CGTCAACGGC
GTCTCGGCGA TGCATTCCGA CCTGATGAAG GAGACCGTGT TTCACGATCT CAACTTCCTC
TACCCCGGCC GCATCACCAA CAAGACAAAC GGCATCACCT TCCGGCGCTG GCTGACGCTG
GCCAATCCCG GCCTGACCGA GCTGGTCCGT TCGGTGGCCG GCGACGAGGT GCTGGACGAT
CCGACCCGGC TGGAGCGGCT GGAAGCCTTC GCCGGCGACA GCGCGTTCCA GCAGCAGTTC
CGCAGCGTCA AGCATCGCAA CAAGGTGGCG CTGGCGCGGC TGATCGGCGA GCGCAACAAC
ATCCGGATCG ACCCGAGCGC GCTGTTCGAC GTCCAGATCA AGCGCATCCA CGAATACAAG
CGGCAGCTGC TCAACGTGCT CGAGACCATC GCGCTGTATC AGGCGATCAA GGACGAGCCG
AACCGCGACT GGGTGCCGCG CGTCAAGATT TTCGCCGGCA AAGCCGCGGC GAGCTATCGC
TACGCCAAGC TGATCATCAA GCTGATCAAC GACGTCGCCG AGGTGGTGAA CAACGACGCC
TCGATCGGCG GCAAGCTGAA AGTGGTGTTC CTCGCCGACT ACAATGTCAG CCTCGCCGAG
GTGATCATTC CGGCCGCCGA CCTGTCGGAG CAGATCTCGA CCGCCGGCAT GGAAGCCTCC
GGCACCGGCA ACATGAAGCT GGCGCTGAAC GGCGCGCTGA CGATCGGCAC GCTTGACGGC
GCCAATATCG AGATCCGCGA TCTGGTCGGC CCGGAGAACA TCGCGATCTT CGGCATGGAA
GCGCTTGAAG TGGTGGCGCG CCGCGCCCAG GGGCTCGACG CCACCGATGT CATCAACCGC
TCGCCGCAGC TCGCCAACGC GATCCGCGCG ATCGACTCCG GCGTGTTCTC GCCCGACGAC
CGCGCCCGGT TCGCCTCGGT GGCCCACGCG CTGCGCCACC TCGACCACTA CATGGTCAGC
GCCGACTTCG ACAGCTATTA CGAGGCCCAG CGCGGCATCG ACGCGCGCTG GCGCGCCGGC
TCCGCCTGGA CCCGCGCCGG CATCCTCAAC GTCGCCCGGA TGGCGTGGTT CTCGTCCGAC
CGCACCATCC GCGAATACGC CGAAGAGATC TGGAACGTGC CGACCAAGCC GGCGACCCAG
CCCTCCCCGG CACGGCAGGC GGGATAG
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| Protein sequence | MVVVSSAWNG HLPVQSLPEK SSSQSAPLDE LALAEIKSAI LAKLTLAIGK EAAHATKHDW
YKASALALRD RIVHRWLVSE KESYDAGRKR VYYLSLEFLI GRLFTDSLNN MGLLAQFDAA
LGDLGVGLND LRKCEPDAAL GNGGLGRLAA CFMESMATLE IPAYGYGIRY DYGLFRQIIN
HGWQQEFPDE WLSFGNPWEL QRPEVVYQVK FGGHVDQITD AKGYTRAVWT PGETVQAIAY
DTPIVGWRGE HVNALRLWSA RAPDPLLIDV FNTGDYLGAT AHEARAEAIC KFLYPNDESP
AGRELRLRQE YFFVSASLQD LIKRHLDSDG QIRNLAKKAA IQLNDTHPSL AVAELMRLLV
DVHGLRWDDA WQITVATLSY TNHTLLPEAL ETWPLDLFQR TLPRHLEIIY RINEVHLGLA
EARSPGDIEF RASVSLIDEK AGRRVRMGHL AFIGSHRVNG VSAMHSDLMK ETVFHDLNFL
YPGRITNKTN GITFRRWLTL ANPGLTELVR SVAGDEVLDD PTRLERLEAF AGDSAFQQQF
RSVKHRNKVA LARLIGERNN IRIDPSALFD VQIKRIHEYK RQLLNVLETI ALYQAIKDEP
NRDWVPRVKI FAGKAAASYR YAKLIIKLIN DVAEVVNNDA SIGGKLKVVF LADYNVSLAE
VIIPAADLSE QISTAGMEAS GTGNMKLALN GALTIGTLDG ANIEIRDLVG PENIAIFGME
ALEVVARRAQ GLDATDVINR SPQLANAIRA IDSGVFSPDD RARFASVAHA LRHLDHYMVS
ADFDSYYEAQ RGIDARWRAG SAWTRAGILN VARMAWFSSD RTIREYAEEI WNVPTKPATQ
PSPARQAG
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