Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5180 |
Symbol | |
ID | 6412880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5584418 |
End bp | 5585347 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642715070 |
Product | Phosphogluconate dehydrogenase, NAD-binding, putative-like protein |
Protein accession | YP_001994143 |
Protein GI | 192293538 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAGCG CTCCGAAACA GTGGCAGGTC GGGATCGTCG GCTACGGCGA GGTTGGCAAA ATTCTCGCCG AGGATTTGCG CGCGCAGGGC GTCAAGGTCG CAGCCTATGA TGTCAAGCTC GCCGACGATC GCGGCGGGCC GCTGCGCGAA CACGCCAGCC GCCACGACGT TGTACTGACG ACGTCGCATG CGGAGCTTGC AGCCCGCAGC GATTTCATCA TCTCGGCGGT GACGGCGAGC CAGACCGTCG CGGTGGCCGA AGCCTGCGCC GGCGCCATCA ACCAAGGCAC CTGGTTTCTC GATTTCAACT CGGCCTCGCC CGGCGCCAAG CAGCGCGCAG CCTCCCTGAT CGACGGCGCT CAAGGTCGCT ATGTCGAAGG CGCGGTGATG ACCTCGGTGC CGCCGTATCG GATCAAGGTG CCGCTGCTGC TCGGCGGGGC GTACGCGGCG GAGCTGGCGC CGCTGATCAA TACACTAGGC TTTGCCGCCA AGCCGGCGAG CGACCAGCTC GGCGTCGCGT CCGCCACCAA GATGTGCCGC AGCATCATGA TCAAGGGGCT GGAGGCGATG GTGATCGAGA GCTTCACCAC CGCGCGGGCC TACGGCGTCG AGGACGCGGT GATCGCATCG CTGCAGGAGA CGTTTCCGTC GATCGATTGG GAGAAGCAGG GGGCCTACTT CTTCCAGCGC GTGATCGAAC ACGGCCGCCG CCGCGCCGAA GAAGTCCGCG AAGTCGCCGA GACGGTGCGC GAGGCCGGCC TGACGCCGTG GTCCGCACAA GGCACTGCCG AGCGGCAAGC CTGGGTGGCT GACCTCGCCG ACGAAGGCCT GTTCGGCACG CGCGGCGCAA CCGGCTTCGC GCGTAGTCCG GACTGGCGGA CGGAAGCGGA TCGGATTTTG GCGAAGGTGA AGGACGAGAC GAAGACGTGA
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Protein sequence | MGSAPKQWQV GIVGYGEVGK ILAEDLRAQG VKVAAYDVKL ADDRGGPLRE HASRHDVVLT TSHAELAARS DFIISAVTAS QTVAVAEACA GAINQGTWFL DFNSASPGAK QRAASLIDGA QGRYVEGAVM TSVPPYRIKV PLLLGGAYAA ELAPLINTLG FAAKPASDQL GVASATKMCR SIMIKGLEAM VIESFTTARA YGVEDAVIAS LQETFPSIDW EKQGAYFFQR VIEHGRRRAE EVREVAETVR EAGLTPWSAQ GTAERQAWVA DLADEGLFGT RGATGFARSP DWRTEADRIL AKVKDETKT
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