| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5169 |
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| Symbol | |
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| ID | 6412869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5573343 |
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| End bp | 5573942 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642715059 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001994132 |
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| Protein GI | 192293527 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAC AAGCCAAATC CATCCGCCCG CTGGTCGTGA TCGCTGCGTT TGCCGGCAGC
CTGATCGTGG GCCTCGTGGT CGTGCTGTGG CTGCTTGGCG GTCTGCAGAA GATCTCGGCA
CCGGCGACGA TCGGTGGTGC GTTCCGCCTG ACCGACCAGA ACGGCCAGGT CATCACCGAA
CAGAGCATGA AGGGTAAGCC GACCCTGATC TTCTTCGGCT TCACCCGCTG CCCGGACGTC
TGCCCGACCT CGCTGTTCGA GCTGTCGCAG GTGCTGGGCG CGATGGGCCC CGATGCCGAC
CGCATCAATG CGTATTTCGT TTCGGTGGAT CCCGAGCGCG ACACCCCGCA GTCGATGAAG
GACTATCTGT CGAGCTTCGA TCCGCATCTG AAGGGGCTGG TCGGCACACC GGAGGCCACC
GAGAAGATCG AGAAGGCCTA CCGGGTCTAT GCCAAGAAGG TTCCGCTCAA GGACGGCGAC
TACACGATGG ATCACACCGC GCTGATCTAT CTGATGGACA AGTCGGGCAA TTTCATTTCG
CCGTTTAACA TCAAGCGCAA GCCCGAAGAG GCTGCGGCCG ATCTGAAGCG GTATCTGTAG
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| Protein sequence | MSAQAKSIRP LVVIAAFAGS LIVGLVVVLW LLGGLQKISA PATIGGAFRL TDQNGQVITE
QSMKGKPTLI FFGFTRCPDV CPTSLFELSQ VLGAMGPDAD RINAYFVSVD PERDTPQSMK
DYLSSFDPHL KGLVGTPEAT EKIEKAYRVY AKKVPLKDGD YTMDHTALIY LMDKSGNFIS
PFNIKRKPEE AAADLKRYL
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