| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5149 |
|---|
| Symbol | |
|---|
| ID | 6412849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 5546890 |
|---|
| End bp | 5547690 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642715039 |
|---|
| Product | Carbon-monoxide dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001994112 |
|---|
| Protein GI | 192293507 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.870406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCGA CGAATTACCA CCGCGCCTCT TCGGTCGACG AAGCCGTGGC GCTGATCGCC
AAGGGCAGCG ACGCCAAATT GCTTGCCGGC GGCCATACGC TGCTGCCGGT GATGAAGCAG
CGGCTCGCAG CTCCGGGCGA TCTCGTCGAC ATCGCCAAGA TCCCGGCGCT GATCGGGATC
GAGGCCAGCG GCGACACGCT GACCATCAAG GCGGCGACCA CCTACTACGA CATCATGCAC
AATGCCGACG TGAAGCGCCT GATCCCGGCG ATCGCGCATC TCACCTCGGT GCTGGGCGAT
CCGGCGGTGC GCTATCGCGG CACCATCGGC GGCTCGGTCG CCACCAACGA TCCCGCGGCG
GACTATCCGG CTGCGATCCT GGCGCTGAAC GCCACGGTGA AGACCAACAA GCGCGAGATC
CCGGCGGATC AGTTCTTCAA GGGACTGTTC ATGACCGCGC TTGAGGACAA CGAGATCATC
ACCGCGATCT CGTTCCCGGT GCCGGAGAAG GCCGGCTACG CCAAGATGCG CAATCCGGCG
TCGCGCTTCG CGCTGACCGG CGTGTTCGTC GCCAAGCTGA AGAGCGGCGA GATCCGCGCC
GCCGCCACCG GCGCCTCGCA GGACGGCGTG ATGCGGGTGG CGGTGATCGA ACAGGCGCTG
CAGGCGAACT GGTCGGCCTC CGCCCTCGAC GGCGTGAAGG TGTCGGACGA AGGCCTGATC
GAGGATATCC ACGGCACCTC CGACTACCGT GCCAACTTGA TCAAGGTGAT GGCGCAGCGC
GCGGTCCAAG CCGCAGGCTG A
|
|---|
| Protein sequence | MYSTNYHRAS SVDEAVALIA KGSDAKLLAG GHTLLPVMKQ RLAAPGDLVD IAKIPALIGI
EASGDTLTIK AATTYYDIMH NADVKRLIPA IAHLTSVLGD PAVRYRGTIG GSVATNDPAA
DYPAAILALN ATVKTNKREI PADQFFKGLF MTALEDNEII TAISFPVPEK AGYAKMRNPA
SRFALTGVFV AKLKSGEIRA AATGASQDGV MRVAVIEQAL QANWSASALD GVKVSDEGLI
EDIHGTSDYR ANLIKVMAQR AVQAAG
|
|---|
| |