| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5148 |
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| Symbol | |
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| ID | 6412848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5544427 |
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| End bp | 5546781 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715038 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_001994111 |
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| Protein GI | 192293506 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATCG AGGGTATCGG CGCGCGCGTC GCGCGCAAGG AAGACCGCCG CTTCATCACC
GGCCGCGGCC GCTATGTCGA CGACATCAAG CTACAGGGCA TGACGTATGC GCATTTCGTG
CGCAGCCCGC ACGCGCACGC CAAGATCACC GGCATCGAAC TCGACGCCGC CAAGGCGATG
CCGGGCGTGG TCGACGTGCT CACCGGTCAG CAGATCGTCG ACGACAAGGT CGGCAATCTG
ATCTGCGGCT GGGCGATCCA CTCCAAGGAC GGCTCGGCGA TGAAGATGGG CGCGTGGCCG
GCGATGGCGC CGGAGACGGT GCGCTTTGTC GGCCAGGCGG TTGCGGTGGT GATCGCCGAA
AGCAAGAACC TCGCCCGCGA CGCCGCCGAG GCCGTGGTGG TTCATTATGA GGAGCTGCCG
GCAGTCGCCA ACATCAAGGC GGCGATCGCC GATGGTGCAG CGCAGCTTCA CCCCGAAGCG
CCCGGCAATA TCGTGTACGA CTGGGAGATC GGCGACCAGA AGGCAACCGA CGAGGCGTTC
AGCAAGGCCG CCAACGTCGT CTCGATCGAA CTCACCAACA ACCGGCTGGT GCCGAACGCG
ATGGAGCCGC GGGCGGCGCT CGCCGAATAC AATCCGGCCG AAGAGCACTT CACGCTCTAC
ACCACCTCGC AGAACCCGCA TGTCGCCCGC CTGGTGCTGT CGGCATTCTA CAACATCGCC
CCCGAGCACA AGCTGCGGGT GGTGGCGCCC GATGTCGGCG GCGGCTTCGG CTCCAAGATC
TTCATCTATC CGGAAGAGAT GGTGGCGCTG TGGGCCTCGA AGAAAACCGG CCGCCCGGTG
AAATGGACCG GTGACCGCAA CGAAGCCTTC GTCACCGACG CGCACGGCCG CGATCATCTG
TCGAAAGCCG AGATGGCGTT CGATGCCGAC AACAAGATGC TCGGCCTGCG GGTGAAGACC
TACGCCAATT TCGGCGCCTA TATGTCGCTG TTCTCGTCGT CGGTGCCGAC CTATCTGTAC
GCCACGCTGC TGAGCGGCCA GTACAACATC CCGGCGATCT ATACCGAAGT GGTGGGCGTC
TATACCAACA CCACCCCGGT CGACGCCTAT CGCGGCGCCG GCCGCCCCGA GGCCTGCTAC
CTGCTGGAGC GCTTGGTCGA GACCGCGGCG CGGCAGCTCA AGGTCGATCC GGCCGAACTG
CGGCGCAAGA ACTTCATCAC CCAGTTCCCG CACCAGACCC CGGTGATCAT GGCGTACGAC
ACCGGCGACT TCAACGCGTC GCTCGACGCC GCCTTGAAGG CGATCGACTA CGCCGGCTTC
CCGGCCCGCA AGGCCAAGGC CAAGAGCGAG GGCAAGCTGC GCGGCCTCGG CCTGTCCTGC
TACATCGAAG CCTGCGGCAT CGCGCCGTCC AAGGCGGTCG GCTCGCTCGG CGCCGGCGTC
GGGCTGTGGG AGTCCGCGGA AGTCCGCGTC AACCCGGTCG GCACGATCGA GATCCTGACC
GGCTCGCACA GCCACGGCCA GGGCCACGAG ACGACCTTCG CGCAATTGGT CGCGGACCGA
CTCGGCATCC CGATCAACCA GGTGTCGATC GTCCACGGCG ACACCGACAA GGTGCAGTTC
GGCATGGGCA CTTACGGCTC GCGCTCGGCA GCGGTCGGCA TGTCGGCGAT CTTCAAGGCG
ATGGAGAAGG TCGAAGCCAA GGCCAAGAAG ATCGCGGCGC ATCAGCTCGA AGCCAGCGAG
AACGACATCG TCATCGAGAA CGGGGAGTTC AAAGTCACCG GCACCGACAA GGCGATCGCG
CTGCCGATGG TCGCGCTCGC CGCCTACACG GCGCACAACC TGCCGGACGG CATGGAGCCC
GGCCTGAAGG AGAGCGCGTT CTACGATCCG ACCAACTTCA CCTTCCCGGC CGGCTCCTAC
ATCTGCGAAG TCGAGGTCGA TCCGGGCACC GGCAAGACCT CGTTCGTCAA CTTCGTCGCG
GTCGACGATT TCGGCCGGCT GATCAACCCG ATGATCGTCG AAGGCCAGGT CCATGGCGGC
CTGGTACAGG GCATCGGCCA GGCGATCCTG GAACACGCAA TCTATGACGC CGACGGCCAG
CTCGTCACCG CGTCGTTCAT GGACTACGCG ATGCCACGCG CCGACGACGT GCCGTCGTTC
AACATCTCGC ACACCACGAC GCTGTGTCCG GGCAATCCGC TCGGCGTCAA GGGCTGCGGC
GAGGCCGGCG CGATCGGCGC TTCGGCGGCG GTCATCAACG CCATCACAGA CGCGATCGGT
AACAACCGGC TGGAAATGCC GGCGACGCCC GACCGGGTGT GGCACGCGAT GCAGCTGCAG
CAGGCGGCGG AGTAA
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| Protein sequence | MGIEGIGARV ARKEDRRFIT GRGRYVDDIK LQGMTYAHFV RSPHAHAKIT GIELDAAKAM
PGVVDVLTGQ QIVDDKVGNL ICGWAIHSKD GSAMKMGAWP AMAPETVRFV GQAVAVVIAE
SKNLARDAAE AVVVHYEELP AVANIKAAIA DGAAQLHPEA PGNIVYDWEI GDQKATDEAF
SKAANVVSIE LTNNRLVPNA MEPRAALAEY NPAEEHFTLY TTSQNPHVAR LVLSAFYNIA
PEHKLRVVAP DVGGGFGSKI FIYPEEMVAL WASKKTGRPV KWTGDRNEAF VTDAHGRDHL
SKAEMAFDAD NKMLGLRVKT YANFGAYMSL FSSSVPTYLY ATLLSGQYNI PAIYTEVVGV
YTNTTPVDAY RGAGRPEACY LLERLVETAA RQLKVDPAEL RRKNFITQFP HQTPVIMAYD
TGDFNASLDA ALKAIDYAGF PARKAKAKSE GKLRGLGLSC YIEACGIAPS KAVGSLGAGV
GLWESAEVRV NPVGTIEILT GSHSHGQGHE TTFAQLVADR LGIPINQVSI VHGDTDKVQF
GMGTYGSRSA AVGMSAIFKA MEKVEAKAKK IAAHQLEASE NDIVIENGEF KVTGTDKAIA
LPMVALAAYT AHNLPDGMEP GLKESAFYDP TNFTFPAGSY ICEVEVDPGT GKTSFVNFVA
VDDFGRLINP MIVEGQVHGG LVQGIGQAIL EHAIYDADGQ LVTASFMDYA MPRADDVPSF
NISHTTTLCP GNPLGVKGCG EAGAIGASAA VINAITDAIG NNRLEMPATP DRVWHAMQLQ
QAAE
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