Gene Rpal_5080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5080 
Symbol 
ID6412774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5468151 
End bp5468423 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content63% 
IMG OID642714965 
Producthypothetical protein 
Protein accessionYP_001994044 
Protein GI192293439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAG GCCCGTCGGC TGCGGTGGAG AACAAAATCA TCACTCTGGT GGAGTCGATC 
CTGGCGCAGA ACGGCCTCGC GGGCGGCATC GAGCGCGACA CGACATTCGC CGATGCGGGG
CTGACTTCGA TGGAGATGGT CAACCTGATG CTCGCGGTCG AAGCCGAATT CGATATGACG
CTGCCTCAGT CGGACATCAC GCCGGAGAAT TTCACTTCGG CAGCGACCGT CGCGCAGCTC
GTGTTGCGCC GTCAGCACGC CCAGGCGGCG TAG
 
Protein sequence
MQAGPSAAVE NKIITLVESI LAQNGLAGGI ERDTTFADAG LTSMEMVNLM LAVEAEFDMT 
LPQSDITPEN FTSAATVAQL VLRRQHAQAA