| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5077 |
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| Symbol | |
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| ID | 6412771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5464614 |
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| End bp | 5465345 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714962 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001994041 |
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| Protein GI | 192293436 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.453828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAGG TGGTGGTGAC CGGCGGCAGC CGGGGCATTG GGCTTGCGAT CGCACGCCGC
CTCGCAGCGG CCGGCTACGG CGTGATCGCG GTGGCACGAC GCGAGAGTGA GGAACTCACC
GCGGCGATTG CCGAGGCTTC GCAAGGGCCC GGCACGATCA GCTTCAAGGC TTACGATCTC
GGCGACATCG ACGGCCTGGC CGGCTTCGCC AAGTCGCTTC GCCAGGAATT CGGCAAGATC
TACGGCCTCG TCAACAATGC CGGCATCGGC ACCGAGGGCG TGCTCGCGAC CATGCACAAC
AGCCAGATCG AGACGCTGCT GCGCATCAAC GTCACCTCGC CGATCGTGCT GACCAAGTAC
ATCGTCCGCC ACATGATGGC CGATGGTGCG GGCCGCGTGA TCAACATGTC ATCGATCATC
GGCTCGACCG GCTACAACGG CCTGTCGGTG TACGGCGCCA CCAAGGCGGC GGCGATCGGC
TTTACCCGCT CGCTCGCGCG CGAGGTCGGC CGGCTCGGCA TCACCGTCAA CGCGATTGCG
CCCGGATTCA TCGACACAGA ATTGACCGCC GGGCTCGCTG GCGAAGGCCG CCAGAAGATC
GCCGGCCGCA GCGCGCTGCG CCGCCTGGCG GAAGCCGACG ACGTCGCCCA GATGGTCGAA
TTCCTGCTCG GCGACGGCGG CCGCAACATC ACCGGCACAG TGCAGACGAT CGACGCCGGG
AACACGGCGT AG
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| Protein sequence | MRKVVVTGGS RGIGLAIARR LAAAGYGVIA VARRESEELT AAIAEASQGP GTISFKAYDL
GDIDGLAGFA KSLRQEFGKI YGLVNNAGIG TEGVLATMHN SQIETLLRIN VTSPIVLTKY
IVRHMMADGA GRVINMSSII GSTGYNGLSV YGATKAAAIG FTRSLAREVG RLGITVNAIA
PGFIDTELTA GLAGEGRQKI AGRSALRRLA EADDVAQMVE FLLGDGGRNI TGTVQTIDAG
NTA
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