| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5076 |
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| Symbol | |
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| ID | 6412770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5463242 |
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| End bp | 5464621 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714961 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001994040 |
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| Protein GI | 192293435 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.273302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCCGC GTGAGATCGT CGCTCTACGC CACTATCTCA CCACTGATCT GACCAGCCGC
ACGCTGTCGG ACGCGAGCGA TGAGATCGCG TTCGCCGACA TCGTGCGTGG GACCTGTTTC
GCCGGCAAGC TGCCTGAGCT CGCCGGCTGT TCAGTGCTGT TGTCGCTGTC GACGCAGCTC
GTCACTGGAC TCGCAATGAT CGAACTCGAC GGCGTGGCGC GGCGGATGCT GCTGTGCCCA
CCGGACGTCG ATATGACCTA CGCCGCCGAC CTGATCGCGG ATGCGGAGAT CGACGCCATC
GTGACAGATG CGCCGGAGCG GTGGCAGGAC CTCGGCGTCA GCGCCATCGT CACAGCAGGT
CTACCATTGC AGCCTGCGAC CCCTATCGCA GCCACGCATG CCACGTCTTG GTTGATGCTG
ACCTCCGGCA CCACCGGCCG TCCGAAGATC GTTGCGCATA CTCTGGCGGC GCTGACCGGT
GCGATCGTCG GCGACAACGT CGCAAAGGAT GCGTCTCCGA TCTGGGCGAC CTTCTACGAC
ATCCGCCGCT ACGGCGGCCT GCAGATTTTC CTCCGCGCCG TGCTCGGCGG CGGCTCGATG
GTGCTCTCCG CGCCCGGCGA AGCGATTGGC GATCATCTGG CGCGCCTCGC TGCGCGCGGC
GTGACCCACA TTTCCGGCAC GCCGTCGCAT TGGCGCAAGG CACTGATGAA TCCGGCGATC
GGCGGCTTCC GCCCCGGCTA TGTCCGCTTG TCTGGCGAGA TCGCCGATCA AGCCGTGCTC
GACGGTCTGC GCAACGCGTT TCCCGATGCG TCCATCGGCC ACGCCTACGC CTCGACCGAG
GCCGGCGTCG GCTTTGCGGT GAATGACGGC CGTGAGGGCT TTCCAGCATC GCTGATCGGC
AACGCGCCCG GCATCACCAT GAAAGTGGTC GACGGCTCGC TGCGGATCAA ATCGACCCGC
ACCGCACATA CTTACGTCGG CCGCAGCGCG CCGCCGCTGA CGGATGCGGA CGGCTTCGTC
GACACCGGTG ACATCGTCGA GCTGCGCGAC GATCGTTATT ACTTCGTCGG CCGCCGCGAC
GGCGTCATCA ACGTCGGGGG CCTCAAGGTT CATCCCGAGG AAGTCGAAGC CGTGATCAAC
CAGCATCCCT CGGTGCGGAT GTCGCGGGTG CGGGCGCGTC GCAGCCCGAT CACCGGCGCG
CTGGTGGTGG CCGAGGCGGT GCTCGCAAGC GTCGCGGACG CCGGGCGCAC TGGAGCAATC
CGCGAAGCGA TCCTCGCCAA TTGCCGCGCC GCGCTGCCGC CGCACAAGGT CCCGGCGTCG
ATCCGTTTCG TGCAGCAACT CGACGTCACC GCCTCCGGAA AGCTGGCCCG CCATGCGTAA
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| Protein sequence | MSPREIVALR HYLTTDLTSR TLSDASDEIA FADIVRGTCF AGKLPELAGC SVLLSLSTQL
VTGLAMIELD GVARRMLLCP PDVDMTYAAD LIADAEIDAI VTDAPERWQD LGVSAIVTAG
LPLQPATPIA ATHATSWLML TSGTTGRPKI VAHTLAALTG AIVGDNVAKD ASPIWATFYD
IRRYGGLQIF LRAVLGGGSM VLSAPGEAIG DHLARLAARG VTHISGTPSH WRKALMNPAI
GGFRPGYVRL SGEIADQAVL DGLRNAFPDA SIGHAYASTE AGVGFAVNDG REGFPASLIG
NAPGITMKVV DGSLRIKSTR TAHTYVGRSA PPLTDADGFV DTGDIVELRD DRYYFVGRRD
GVINVGGLKV HPEEVEAVIN QHPSVRMSRV RARRSPITGA LVVAEAVLAS VADAGRTGAI
REAILANCRA ALPPHKVPAS IRFVQQLDVT ASGKLARHA
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