Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5045 |
Symbol | |
ID | 6412739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5426717 |
End bp | 5427919 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714930 |
Product | diguanylate cyclase |
Protein accession | YP_001994009 |
Protein GI | 192293404 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCGA ACAGCAAGAT CGCGAACGCC GTCTACATCG AATTCGTTCG GTTGCTGTAC ACCGCGCGCT GGCCCATCGT TGTGGTGGGC TGTGCGATGC TGACCACCGG CCTCGCGGTC GCCTGGCAGA CCCGCGACGT GGTGATGGCG GTGATCGGAC TCACCGGCAT GGCCGTGACG CTGGGACGGC TCGCGCTGTG TTTCGCGTTC GACCACGCGG TTGCAAAGCG TCCGCTCGAT GTCGAAACCG CAAAACGATG GGAACGCCGT CTCGCTGTCG GCGTGATCTC GACCGGCGTC TGCGTCGGTG CCTTCGCGGT GCGTTGCTTC CTGCTGTCAG ATCTGGCGGC GCATATGATT GCCGGCGGTC TGGTGTTCGG CTATTGCGCC GGCACCACCA CGCGATTTTC GATCCGGCCA TGGATCGTGC AGGCCTCGCT GGTGGTCTCA GTGACTCCGG CGGTCGCGGC GGCGCTGTGG AATTTCGACC TTCTGCACGT GGCTCAGGCG GTGTTGTTCC TGCTGTTCGC CTTGGGCGGC CTCGAGCTGA TCGACTACAT CCACGCCACC ACCGCCGAGC AACTAACGCT ACGCGCCGAA GCGACGCGGC TCGCCCGTGC CGATGCGCTG ACCAACCTGC CGAACCGGCG GCATCTGGTC GAACATTTCA ACGAACTCGC CAAGCGCCTG GCCCGCCATG GCGAGAACTT CGCGGTGATC AGCCTCGATC TCGATTTCTT CAAGGAGGCC AACGACCGCT TCGGCCACGC GGCCGGCGAT GAGATCCTGC GCATCGTCGC CGAACGGATG ACCGAGCTAC TGGCCGACGA TGACCTCGCG GCGCGGATCG GCGGCGACGA ATTCGTCGTC GTGCAGGCCA ACGTCTCGGA TGCGGCAGAA GCGGACGACC TCGGCCGCCG CATCGTCGCG GCGCTGTCGG AGCCTTATGC GATCGCCGGC GAAGCAGTAA TGATCGGCGC CAGCTTCGGC CGCGCGTTGG CGCCGGCCGA TGGCGCCACG CTGGACGAAT TGCTGCACAA GGCCGATGAA GCCTTGTATG CGGTGAAACG CAACCGGCCC GGCCGGGTTC GCGAGGTCGC CCCCGGCACT GATCATGCGC CGCTGGTGCC GGCGATCCCC CCCCTGCCGG AGCACCACCA GACGGCACCG GCGATGCGAT CGACTAACGC CGACGCCGGC TGA
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Protein sequence | MTANSKIANA VYIEFVRLLY TARWPIVVVG CAMLTTGLAV AWQTRDVVMA VIGLTGMAVT LGRLALCFAF DHAVAKRPLD VETAKRWERR LAVGVISTGV CVGAFAVRCF LLSDLAAHMI AGGLVFGYCA GTTTRFSIRP WIVQASLVVS VTPAVAAALW NFDLLHVAQA VLFLLFALGG LELIDYIHAT TAEQLTLRAE ATRLARADAL TNLPNRRHLV EHFNELAKRL ARHGENFAVI SLDLDFFKEA NDRFGHAAGD EILRIVAERM TELLADDDLA ARIGGDEFVV VQANVSDAAE ADDLGRRIVA ALSEPYAIAG EAVMIGASFG RALAPADGAT LDELLHKADE ALYAVKRNRP GRVREVAPGT DHAPLVPAIP PLPEHHQTAP AMRSTNADAG
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