| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4976 |
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| Symbol | |
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| ID | 6412668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5355819 |
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| End bp | 5357141 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714859 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001993940 |
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| Protein GI | 192293335 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.350417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACT TATGTTCTCT CTCAAGAGCG CGGCTTAACG TCGCCGGATT GATCGTCGCC
GCGGGCGCGG CGGTGGTGTG CGGCGTGTTC GAGTACTACG TCGCCGCGCT AGCGATCCAA
GGCGTCGTGA TGGTGTTCGC CGGGCTGGCG CTGTTCCGTA TCAGCCAGAC GCGGCGACTG
CTTGGCGAGG CCAGCGACGT CTGCCGCCGC ATCGCCGACG GCGATTTCGA AGCGCGGATC
CTCGGGATTC CGGACGACGG CCGCACCGGC ACGCTGCTGC GCGCCATCAA CGACATGATC
GACGATTGCG ACGCCTTCGT TCGCGAGGCG ACCGCGGCAA TGACTGCGAT GCATCATAAC
AAGTACTTCC GCCGCATTCT GCCGGGCGGA CTGCACGGCG CGCTGCTGCA CGGTGCCGGC
GCCATCAATA CGGCCGCCGA AAATATCGAG CGGCGGATCA AGAGCTTCGA AGGTCGCACC
GCGGAGCTGG AGGTGACCAC GAGCGCAATC GTCTCCGCGC TCGATCAGGG CTCGGCCGAA
ATGAAAGACA CCGCCGGCAC GCTGACGGTC GGCGCTTCGT CTGCGCGCGA GCGGCTGGCT
TCGGTTGCTG CGGCGTCCGA ACAGGCCGCG GCCAATATGC AGTCGGTTGC GTCGGCGACG
TCGGAGCTGA CGTCGAGCGC CAGCGGTGTG CGCGCCGAGA TCGATCGCTC TGCCGAGATC
GTGGCGCGCG CGGTGAGCAG CGTCGGCGAG GCCAGCGGCA ATGTCGATGC GCTGCAGCAG
GTCGCCAACA ATATCGGCGA GATGGTCAAG GCGATCCAGG CGATCGCCAG CCAGACCAAT
CTGCTGGCGC TCAATGCCAC GATCGAGGCG GCGCGCGCCG GCGACGCCGG CCGCGGCTTC
GCCGTGGTGG CGCATGAGGT CAAGGCGCTG GCGTCGCAGA CCGCACAGTT CACCGGCGAG
ATCGAAGCCC AGGTCGGCGA GGTTCACGGC GCGGCCGGTG CGGTCAGCAG TTCCATTGGC
GAGATCGGCA CGGTCATCGC CGAGATCGAC AGCATCACCC GGCAGGTCGC CGGTGCAGCA
GGCGCGCAGT CGCAGTCGAC CGCCGAGATC GCCCGCAACA TCGACGAGGC CTTTGCGGTG
GTGCGCGAGA TTTCCGAAAC GATCCATGTG CTCGCCGGCA ATGCCGAAGA CAACGAACGC
GCGGCGGCGT CGACGATGAC CACATCGGCG CAGCTGTCTT CGCAGTCGGA GCAACTCGCC
CTGCAGATCA ACGGTTATCT CGGTCAGGTC CGCAAGGAAC TCGTCGAACA ACGAGCCGCG
TGA
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| Protein sequence | MTNLCSLSRA RLNVAGLIVA AGAAVVCGVF EYYVAALAIQ GVVMVFAGLA LFRISQTRRL
LGEASDVCRR IADGDFEARI LGIPDDGRTG TLLRAINDMI DDCDAFVREA TAAMTAMHHN
KYFRRILPGG LHGALLHGAG AINTAAENIE RRIKSFEGRT AELEVTTSAI VSALDQGSAE
MKDTAGTLTV GASSARERLA SVAAASEQAA ANMQSVASAT SELTSSASGV RAEIDRSAEI
VARAVSSVGE ASGNVDALQQ VANNIGEMVK AIQAIASQTN LLALNATIEA ARAGDAGRGF
AVVAHEVKAL ASQTAQFTGE IEAQVGEVHG AAGAVSSSIG EIGTVIAEID SITRQVAGAA
GAQSQSTAEI ARNIDEAFAV VREISETIHV LAGNAEDNER AAASTMTTSA QLSSQSEQLA
LQINGYLGQV RKELVEQRAA
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