| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4952 |
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| Symbol | |
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| ID | 6412644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5331877 |
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| End bp | 5333169 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714835 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001993916 |
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| Protein GI | 192293311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.703499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGC GGAGCTACGA CGTGTCCAAG CCGAACCTGA TCAGTCGCCG CGGCATGATT
CGCGCCGCCG CGGCGGCAAC GGCGATGTTC GCCTGTCCGG TGATTGCCAA AGCCAAGCCG
CGGGTGGTCG TGGTCGGCGG TGGGGCGGGC GGTGCGACAG CCGCGAAATA TCTGCGCCAC
GGCAACGATG CGATCGACGT CACGCTGATC GAGGCCAATC GTCGCTACGT CACGCCGTTC
ACCTCGAACC TGTATCTCGG CGGCCTGAAA CCGTTCGAAA CGCTGTCGTT CGGTTATGAA
GGCGTCGCCG CGCACGGCGT CGGCCTGGTG TTCGATCAGG TCTCGGCGAT CGATCGCGAT
AAGAAAGAAG TGCGGACCTC AGGCGGCGCG CGGCTCGGCT ATGATCGGCT GGTGTTGTCA
CCGGGGATCG ACTTCCGCTG GGACGCTGTC CCCGGCTATT CCGAAGCCGC GTCCGAGCGG
ATGCCGCATG GCTATCGCGG CGGCGCGCAG TTTCAACTGC TGAAGAACCA GCTCGATGCG
CTCAGCGACG GCGCGCTGAT CGTGATCATC GCGCCGCCCA ATCCGTATCG CTGCCCGCCG
GCGCCGTACG AGCGCGCTTC GATGATGGCG CACGCGCTGA AGAGCCGCGG CGTCAAGAAT
GCCCGCATCG TCATTCTCGA CGCGAAGGAT CATTTCGCGA TGCAGACCTT GTTCATCGAC
GGCTGGGAAC GGCATTACTC CGGCATGATC GAGTGGCAGG ACCCGACCAT CCACGGCGGC
ATCAAGGCGG TCGATCCGAA GGCGATGACC GTGACCACCG ATTTCGAGAC CCACAAGGCG
GCGCTGGTCA ACGTCATCCC GCCGCAGATT GCCGGCAAGC TCGGCCGCGC CGCCGGGCTT
GCCGATGCCA GCGGTTTCTG TCCGGTGGAT GCCGGCACCA TGGCGTCGCT GATCGATACG
TCGATTCATG TGATCGGCGA TTCTGCGACC GGCGGCGAGT TCCCGAAGTC CGGCTTTGCC
GCCAACAACG AAGGCAAGAC CGCCGCGATG ATCATCCGCG CCGATCTTAT CGGCGATCGC
CGGATGCCGG TGCGCTTCAC CAACCATTGC TGGAGCGACA TTGCGCCCGA CGACGCGATC
AAGAACGGCG CGCGCTATAC GCCGCAGGAC GGCAAGATCG TGATGTCCGA CCCTTATACC
TCGCAGCTCG ACGAGAGCCC GCAGCTCCGC GCCAAGCAGG CCCGCGAAGC GGCCGGCTGG
TATATCGGAA TGACCACCGA TATATTCGGT TGA
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| Protein sequence | MNLRSYDVSK PNLISRRGMI RAAAAATAMF ACPVIAKAKP RVVVVGGGAG GATAAKYLRH
GNDAIDVTLI EANRRYVTPF TSNLYLGGLK PFETLSFGYE GVAAHGVGLV FDQVSAIDRD
KKEVRTSGGA RLGYDRLVLS PGIDFRWDAV PGYSEAASER MPHGYRGGAQ FQLLKNQLDA
LSDGALIVII APPNPYRCPP APYERASMMA HALKSRGVKN ARIVILDAKD HFAMQTLFID
GWERHYSGMI EWQDPTIHGG IKAVDPKAMT VTTDFETHKA ALVNVIPPQI AGKLGRAAGL
ADASGFCPVD AGTMASLIDT SIHVIGDSAT GGEFPKSGFA ANNEGKTAAM IIRADLIGDR
RMPVRFTNHC WSDIAPDDAI KNGARYTPQD GKIVMSDPYT SQLDESPQLR AKQAREAAGW
YIGMTTDIFG
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