Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4890 |
Symbol | |
ID | 6412576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5258097 |
End bp | 5258426 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642714767 |
Product | hypothetical protein |
Protein accession | YP_001993854 |
Protein GI | 192293249 |
COG category | [S] Function unknown |
COG ID | [COG5477] Predicted small integral membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAT CCTTCGCATG GATGGCGTGG ACCTCGCCGA CCGCGGCGTT CTTCGTCGCG CTCGCGGGCA TGCTCGCGAC CATGACCTGG CTCGCGGTGG TTGATCCCGA GGTCGAGCGC GTCGGCATCC TGCGGATTCC GACGACGCGC GGCGACCGGC TGTTTCTGTC GCTGATCCTG GCCGCGGTGA TTCATCTCGT CTGGATCGCG GTGGTCGGGA CCGATCCGCT GCTGACGCTG CCGATCGGAG AAGGAGTCGA AGTGTCGAGC CTGTGGCTCG CTACGCTGCT GTCGTTGGTC TCGGCCGTTG CGATCTTCCG CACCGTCTGA
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Protein sequence | MMESFAWMAW TSPTAAFFVA LAGMLATMTW LAVVDPEVER VGILRIPTTR GDRLFLSLIL AAVIHLVWIA VVGTDPLLTL PIGEGVEVSS LWLATLLSLV SAVAIFRTV
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