| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4879 |
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| Symbol | |
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| ID | 6412565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5244327 |
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| End bp | 5245769 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714756 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_001993843 |
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| Protein GI | 192293238 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.80038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGTG ATTCCGGTAA AAAACTGTTC GTTGGCCCCC GCTTCCGCCG CATCCGGCAG
CAGCTCGGGC TGTCGCAAAC CCAGATCGCC GAAGGTTTGG GCATTTCTCC CAGCTACGTC
AACCTGATTG AGCGCAACCA GCGCCCGGTG ACCGCCCAGA TCCTGCTGCG GTTGGCCGAG
ACCTACGATC TCGACCTGCG CGACCTGGCG ACCGCCGACG AGGACCGGTT CTTCGCCGAA
CTCAACGAGA TCTTCTCCGA TCCCTTGTTC CGGCAGATCG ACCTGCCCAA GCAGGAGCTG
CGCGACCTCG CCGAGCTCTG CCCCGGCGTC ACCCATTCGC TGCAGCGGCT GTATGCCGCC
TATACCGAGG CGCGCCGCGG CGAGACCATG GTGGCGGCGC AGATGGCCGA CCGCGAACAG
ATCCGCTACG AGGCCAACCC GATCGAGCGG ATCCGCGACC TGATCGAGGC CAACCGCAAT
TATTTCCCCG AACTGGAGCA GGCCGCCGAG GCGGTGCGCG ACGAGCTCAA TATCGGCTCG
CAGGAGATGT TCGGCGCACT GAGCGACCGG CTGCGCGAGC GGCATTCGAT CACCACCCGG
ATCATGCCGG TCGACGTGAT GCGCGAAACG CTGCGCCGGT TCGACCGCCA CCGCCGGCAA
TTGCTGATCT CCGAACTGAT CGACGGCCCC GGCCGCGCCT TCCAGGTCGC GTTCCAGACC
GGGCTGACCG AGCATGGCGG CGTCATGGAC GCGATCGTGC ATCGCGCCGG CGGGCTCGAA
GACCAGGCGC GGCGGCTGTA TCGCATCACG CTCGGCAACT ACTTCGCCGC CGCGGTGATG
ATGCCCTACG CGGCGTTCCA CGCCGCCGCC GAGCAGCTCT CCTACGACGT CAACGTGCTG
GCGCAGCGTT TCAATGCCGG CTTCGAACAG GTCTGCCACC GCCTCACCAC GCTACAGCGC
CCGAACGCGC GCGGCGTGCC GTTCTTCATG CTGCGGGTCG ACAATGCCGG CAACGTCTCG
AAGCGGTTCT CCTCCGGCAC CTTCCCGTTC TCGAAATTCG GCGGCACCTG CCCGCTGTGG
AACGTGCACT CGACCTTCGA TACGCCCGAC CGGCTGCTCA AGCAGGTGAT CGAACTACCC
GACGGCAGCC GCTACTTCTC GATCGCCCAG ATGGTCCGCC GCCCGATCGC GCCGCACCCG
CAGCCGCAGC CGCGTTTCGC CATCGGCCTG GGGTGCGAAA TCCGCCACGC CTCGAAACTG
ATCTACGCCG CCGGCATGGA CCTGGAGAAA GCCGAAGGCA CCCCGATCGG CGTCAACTGC
CGCCTCTGCG AGCGCGAACA CTGCTCGCAA AGAGCGGAGC CGCCGATCAC ACGGACGCTG
ATCCTGGACG AGAACACGCG GCGGGCGAGC AGCTTTGCGT TTAGTAATGC GCGGGAGTTG
TGA
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| Protein sequence | MAGDSGKKLF VGPRFRRIRQ QLGLSQTQIA EGLGISPSYV NLIERNQRPV TAQILLRLAE
TYDLDLRDLA TADEDRFFAE LNEIFSDPLF RQIDLPKQEL RDLAELCPGV THSLQRLYAA
YTEARRGETM VAAQMADREQ IRYEANPIER IRDLIEANRN YFPELEQAAE AVRDELNIGS
QEMFGALSDR LRERHSITTR IMPVDVMRET LRRFDRHRRQ LLISELIDGP GRAFQVAFQT
GLTEHGGVMD AIVHRAGGLE DQARRLYRIT LGNYFAAAVM MPYAAFHAAA EQLSYDVNVL
AQRFNAGFEQ VCHRLTTLQR PNARGVPFFM LRVDNAGNVS KRFSSGTFPF SKFGGTCPLW
NVHSTFDTPD RLLKQVIELP DGSRYFSIAQ MVRRPIAPHP QPQPRFAIGL GCEIRHASKL
IYAAGMDLEK AEGTPIGVNC RLCEREHCSQ RAEPPITRTL ILDENTRRAS SFAFSNAREL
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