| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4878 |
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| Symbol | |
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| ID | 6412564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5242479 |
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| End bp | 5244113 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714755 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001993842 |
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| Protein GI | 192293237 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.347742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCC AGCCACGCGG CATCAGCGCC ATCCACGCTC CGACCTCCTA CAAGAGCGAG
ATCGAAGCGG CCGAAGCTCT CCTCAAGGAC AAGCCGACCT GGAATGGCGT CACCGCCGAG
GCCGTGGCTC GGATGCGCCT GCAGAACCGC TTCAAGACCG GTCTGGACAT CGCCCGTTAC
ACCGCGGCCC AGATGCGCGC CGACATGGCG GCGTATGACG CCGACCCGAC CAAGTACACC
CAGTCGCTGG GCTGCTGGCA CGGCTTCATC GCGCAGCAGA AGCTGATCTC GATCAAGAAG
CACGGCGGTG GCCGCACCGA CCGTCGTTAC ATCTACCTGT CGGGCTGGAT GATCGCGGCG
CTGCGCTCGG AGTTCGGTCC GCTGCCCGAC CAGTCGATGC ACGAGAAGAC CTCGGTGCCG
GCGCTGATCG AAGAGATCTA CACCTTCCTG CGCCAGGCGG ATTCGCGCGA GCTGAACGAC
CTGTTCCGCC AGCTCGACAA GGCCCGCGAG GCCCGCGACA AGGCCAAGGA AACCGCGATC
ATCGACCAGA TCGACAATTT CCAGACCCAC GTCGTGCCGA TCATCGCCGA CATCGACGCC
GGCTTCGGTA ACGCCGAGGC GACCTATCTG CTCGCCAAGA AGATGATCGA AGCGGGCGCC
TGCGCGCTGC AGATCGAGAA TCAGGTCTCG GACGAGAAGC AGTGCGGCCA CCAGGACGGC
AAGGTCACCG TGCCGCACGA CGTGTTCATC GCCAAGGTTC GCGCGATCCG TCACGCCTTC
CTCGAGATGG GCGTGGAAGA CGGCATCATC GTCACCCGCA CCGACTCGCT CGGAGCCGGC
CTGACCCAGC AGATCGCCGT CAGCCATCAG CCGGGTGACA TCGGCGACCA GTACAACAGC
TTCCTGGATT GCGAGGAAGT CGATGCCAGC AAGATCGGCA ACGGCGACGT GATCATCAGC
CGCAACGGCA AGCTGCTGCG TCCGAAGCGC CTGCCGAGCA ACCTGTACCA GTTCCGTCCG
GGCACCGGCG CGGACCGCTG CGTGCTGGAC TGCATCACCT CGCTGCAGAA CGGCGCCGAC
CTGCTGTGGA TCGAAACCGA GAAGCCGCAT ATCGAGCAGA TCGCCTCGAT GGTCGATCGG
ATCCGCGAAG TCGTGCCGAA CGCCAAGCTG GCCTACAACA ACTCGCCGTC GTTCAACTGG
ACGCTCAACT TCCGCTGGCA GGTCTATGAC GCCTGGAAGG AAGAGGGCAA GGACGTCAGC
AAGTACAACC GCGCCGAGCT GATGAAGGCC GAATACGACG AAACCCCGCT GGCGATCGAA
GCCGACGCCC GCATCCGCAC CTTCCAGGCG GATTCGGCCA AGCGCGCCGG CATCTTCCAC
CACCTGATCA CGCTGCCGAC CTACCACACG GCTGCGCTGT CGACCGACAA CCTGGCCCGC
GAATATTTCG GCGACCAGGG CATGCTGGGT TATGTTAAGA ACGTGCAGCG CCAGGAAATC
CGTCAGGGCA TCGCCTGTGT GAAGCACCAG AACATGGCCG GCTCGGACAT CGGCGACGAT
CACAAGGAAT ACTTCGCCGG CGACGCGGCC CTGAAGGCCG GCGGCGAACA CAACACGATG
AACCAGTTCA GCTAA
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| Protein sequence | MNFQPRGISA IHAPTSYKSE IEAAEALLKD KPTWNGVTAE AVARMRLQNR FKTGLDIARY
TAAQMRADMA AYDADPTKYT QSLGCWHGFI AQQKLISIKK HGGGRTDRRY IYLSGWMIAA
LRSEFGPLPD QSMHEKTSVP ALIEEIYTFL RQADSRELND LFRQLDKARE ARDKAKETAI
IDQIDNFQTH VVPIIADIDA GFGNAEATYL LAKKMIEAGA CALQIENQVS DEKQCGHQDG
KVTVPHDVFI AKVRAIRHAF LEMGVEDGII VTRTDSLGAG LTQQIAVSHQ PGDIGDQYNS
FLDCEEVDAS KIGNGDVIIS RNGKLLRPKR LPSNLYQFRP GTGADRCVLD CITSLQNGAD
LLWIETEKPH IEQIASMVDR IREVVPNAKL AYNNSPSFNW TLNFRWQVYD AWKEEGKDVS
KYNRAELMKA EYDETPLAIE ADARIRTFQA DSAKRAGIFH HLITLPTYHT AALSTDNLAR
EYFGDQGMLG YVKNVQRQEI RQGIACVKHQ NMAGSDIGDD HKEYFAGDAA LKAGGEHNTM
NQFS
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