| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4788 |
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| Symbol | |
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| ID | 6412474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5153135 |
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| End bp | 5154820 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714666 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001993753 |
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| Protein GI | 192293148 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTCA GCAATCTTCG TATTACGCCG AAGCTAGGCC TGCTGGTTGC AGGTACCATG
ATCGGTCTGT GCGTGGCCGG TATCCTTGCC GGTGTGATGA TGCAGCGTGA GATGCTCAAC
GCTCGGTTCG AGCAGGCCAA AGCCATCACC GAGATGGGGC GCAACCTCGC GATCGGCCTG
CAGAAGAAGG TCGAGGTCGG CGAGCTGACC AAGGAGCAGG CCGTCGCCCA GTTCGCCCGC
GATGCCGCAA TGCTGACCTA CGACAACGGT CAGGGCTATC TGTTCGCCTA CACCATGGAC
GGCGTCACCA TCGCCACCCC GGACAAGAAG GCGATTGGTA CCAACCGGAT GAACACGCCG
ACCGGCGACC GCTATCTGGT GCGCGAGCTG CGCGACGGCG TCGCTACGAA GGGCGACGTC
ACGCTGTATT ATGATTTCCG CCGGCCCGGC ACCGAAGAGA ACATCCGCAA GATGTCCTAC
GGCCTGGCAA TTCCCGGCTG GGACATGTTT GTCGGCACCG GCGCCTATCT CGACGACGTC
GACGCCAAGC TGAAGCCGAT CTTCTGGACC CTCGGCGGCG CGATCTTCGC GATCGCCATC
GTCGCCGGCC TGTTCGCGGT GCTGATCGCC CGCGGCATCA CCCGCCCGCT CGCCAAGCTC
GGCGCCCGGA TGGATTCGCT GGCGCATGGC GAACTGGAGC AGCCGATCCC CGGCATCGAA
CGCGGCGATG AAGTCGGCGA GATGGCCAAG ACCGTGCAGG TGTTCAAGGA CAACGCACTG
CGGATTCGTG ACCTCGAGCG CGCCGAAGAG GCTGCCAAGG AGCACGCCGA AGCCGAGCGT
CGCGCCGCCA TGGAGCAGCT CGCCGACGAG TTCGAGCACA GCGTCAACGG CGTGGTGCAG
TCGGTCGCCA CCGCGACCTC CGGCATGCAG CAGACCGCGC AGTCGATGAC CGCGACCGCG
ACCGATGCCA GCGCCCGCGC TGCGACCGTG TCGTCGGCCT CGGCCAGCGC CTCCAACAAC
GTCAGCACGG TGGCATCGGC CGCCGAGGAG TTGTCGGCCT CGGTCACCGA GATCTCGCGC
CAGGTCGAGC AGTCGCGGGA GATCGCCGGC AAGGCGGTCG ACGACGCCGC GCTCACCAAC
CAGACCGTCA AGTTGTTGGC GACCGGCGCC GAGAAGATCG GCGAGGTGGT GCAGCTGATC
CACTCGATCG CGTCGCAGAC CAACCTGCTC GCGCTCAACG CCACCATCGA GGCCGCCCGC
GCCGGCGAAT CCGGCCGCGG CTTTGCGGTG GTCGCCAGCG AGGTGAAGGC GCTGGCCAGC
CAGACCGCGA AGGCGACCGA GGAAATCTCC GCGCAGGTCG CGGCGATGCA GTCCTCGACC
AACGACGCCG TACAGTCGAT CGGCGGCATC ACCGCGACGA TCGCGCAGAT GAGCGAGATC
ACCATGGCGA TCTCGACCGC GGTCGAGCAG CAGGGCGCGG CGACCCGCGA GATCGCCCGC
AACATCCAGT CGGTGGCGGC GGGATCGACC GAGATCAGCA TGCATATCGG CGGCGTCACC
GAAGCGGCGA GCGCCACCGG TTCGGCCGCC AGCCAGGTGC TCGCCAATGC CCGTGAACTC
GACGCCCAGT CCGGCGAACT CCGCCGCGCG GTCGACGACT TCCTCGGCAA GGTCCGCGCC
GCCTAA
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| Protein sequence | MKFSNLRITP KLGLLVAGTM IGLCVAGILA GVMMQREMLN ARFEQAKAIT EMGRNLAIGL
QKKVEVGELT KEQAVAQFAR DAAMLTYDNG QGYLFAYTMD GVTIATPDKK AIGTNRMNTP
TGDRYLVREL RDGVATKGDV TLYYDFRRPG TEENIRKMSY GLAIPGWDMF VGTGAYLDDV
DAKLKPIFWT LGGAIFAIAI VAGLFAVLIA RGITRPLAKL GARMDSLAHG ELEQPIPGIE
RGDEVGEMAK TVQVFKDNAL RIRDLERAEE AAKEHAEAER RAAMEQLADE FEHSVNGVVQ
SVATATSGMQ QTAQSMTATA TDASARAATV SSASASASNN VSTVASAAEE LSASVTEISR
QVEQSREIAG KAVDDAALTN QTVKLLATGA EKIGEVVQLI HSIASQTNLL ALNATIEAAR
AGESGRGFAV VASEVKALAS QTAKATEEIS AQVAAMQSST NDAVQSIGGI TATIAQMSEI
TMAISTAVEQ QGAATREIAR NIQSVAAGST EISMHIGGVT EAASATGSAA SQVLANAREL
DAQSGELRRA VDDFLGKVRA A
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