| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4767 |
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| Symbol | |
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| ID | 6412453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5132844 |
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| End bp | 5133671 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642714646 |
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| Product | type III effector HopAG1 |
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| Protein accession | YP_001993733 |
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| Protein GI | 192293128 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTTG ATTTCGCGCA AATCGCGGCG CGGGCGATCA ACCTCGGGGA GTCGATGGCG
GACAACAGCG ATACTGCGCC GGGCCTGCGG AATGCGGACG GCTGGACGGC GATCGGCGGC
CAGGCTGGCT CCAATGCCGG CGGCCTGTTC GCCGACCCGC ACGGCCGCAA CTGGTACGTC
AAAACCCCGT CGAGCGACGA TCATGCTCGG AGCGAGGTGC TGGCCAATCG GCTGTATCGG
CTCGCCGGCA CCAACGTCGC CGAGGTCGAG CTGGTGACGC GCGGCAGCCG CCTTGCGGTC
GCAAGCGGGA TGGTCCGCGG CGCCTCGCTC GGCGAAGCGC TGGCGCATCC TGAGAACGGC
GTCGCCGCCG AGGTGTGCCG CGATTTCGCG GTCGATGCCT GGCTCGCCAA TCGCGACGTA
CTCGGCGTCG ATCTCGACAA CGTGCTGGTG ACCCGCGACG GCGGCGTGGT GCGGATCGAC
CAGGGCGGCG CGCTGGCCTA TCGCGCCCGC GGCGCGCGCA AGACCGACTT CGGCAGTGAG
GTGATCGAGT TCGACACGCT GCGCGAGGCC CGCACCAATG CGGTGGCGGC CAGCGTGTTC
GGCGCGATGA CCAGACACGC GCTCGCCGCT TCCGTCGCCA AGGTGGCGCG GCTGACCGAG
CCCGCAATCT CTGCGGTGGT TCGCGACGTG CTGGGCGACA ACGACGCCGC GCGCGCGCTG
ACGGTGCTGC TCTTGGCGCG GCGCGACGAC CTGATCCGCC GCGTTTCGGC GAGCGGCGCT
GCGCCCGCGG TTACCCGCGT CCGCGCGCTC GACACCTTGG AGGAGTGA
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| Protein sequence | MSLDFAQIAA RAINLGESMA DNSDTAPGLR NADGWTAIGG QAGSNAGGLF ADPHGRNWYV
KTPSSDDHAR SEVLANRLYR LAGTNVAEVE LVTRGSRLAV ASGMVRGASL GEALAHPENG
VAAEVCRDFA VDAWLANRDV LGVDLDNVLV TRDGGVVRID QGGALAYRAR GARKTDFGSE
VIEFDTLREA RTNAVAASVF GAMTRHALAA SVAKVARLTE PAISAVVRDV LGDNDAARAL
TVLLLARRDD LIRRVSASGA APAVTRVRAL DTLEE
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