Gene Rpal_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4730 
Symbol 
ID6412416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5091401 
End bp5092708 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID642714609 
ProductO-acetylhomoserine/O-acetylserine sulfhydrylase 
Protein accessionYP_001993696 
Protein GI192293091 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA AGCTCCACCC CGAAACTCTC GCCCTGCATG CCGGCTGGCG CGCCGATCCT 
TCGACCGGCT CAGTCGCAGT TCCTCTGTTC CAGACCACCT CGTACCAGTT TCACAACACC
GAGCATGCGG CGAACCTGTT CGCGCTGAAG GAGCTCGGCA ACATCTACAC CCGGATCGGC
AACCCGACGA CCGATGTGCT GGAGCAGCGC GTCGCGGCGC TGGAAGGCGG CGTCGCCGCG
CTCGCGGTGG CTTCCGGGCA AGCCGCGTCG GCCTTTGCGC TTCAGAACCT CGCCCGCGTC
GGCGACAACG TGGTGTCGTC GACCGACCTC TATGGCGGTA CCTGGAACCT GTTCGCCAAC
ACCCTGAAGG ACCAGGGCAT CGAGGTTCGC TTCGTCGATC CGTCCGACCC GCAGGCGTTC
GAGCGCGCCA CCGACGAGCG CACCCGCGCC TACTATGCCG AGACGCTTCC GAACCCGAAG
CTCGCGGTGT TTCCGATCGA GGAAGTCGCC GCGATCGGCC GCAAGCACGG CATCCCGCTG
ATCGTCGACA ACACCGCAGC GCCGCTGCTG GTGAAGCCGC TCGAGCACGG CGCCGCGATC
GTGGTGTATT CGGCGACCAA GTATCTCGGC GGCCACGGCA CCTCGATCGG CGGCCTGATC
GTCGACGGCG GCAACTTCCC GTGGGAGCAG TTCCCGCAGC GCCAGCCGGC GCTGAACACG
CCGGACCCGA GCTATCACGG CGCCGTGTGG GTCGAGGCAG TGAAGCCGAT CGGGCCGGTG
GCCTACATCA TCAAGGCCCG CACCACGCTG CTGCGCGACC TCGGCTCGGC GCTGTCGCCG
TTCAACGCCT TCCAGATCAT CCAGGGTCTG GAAACGCTGC CACTGCGGAT CGAGCGTCAC
GTCCAGAACG CCCAGAAGGT CGCCGACTAT CTGGAGAAGC GCCCCGAGGT CGTGAAGGTG
ATCCATCCGT CGAAGCAGAG CGGCGTCGCC CGCGAGCGCG CCGAGAAGTA CCTCCAGGGC
AAGTTCGGCG GTCTGGTCGG CTTCGAACTC GCCGGCGGTC GGGAGGCCGG ACGCAAGTTC
ATCGACGCGC TCGAGCTGTT GTATCACGTC GCCAATATCG GTGACGCCCG CAGCTTGGCG
ATCCACCCGG CCAGCACCAC CCACTCGCAG CTCTCCACTG AAGAGCAGCT CGCGACCGGC
GTGTCGGACG GCTACGTGCG GCTGTCGATC GGCCTCGAGC ACATCGACGA CATCCTCGCC
GACATCGACC GCGGCCTCGC GGCAGGACGC CTGGCGAACG CGGCGTAA
 
Protein sequence
MTQKLHPETL ALHAGWRADP STGSVAVPLF QTTSYQFHNT EHAANLFALK ELGNIYTRIG 
NPTTDVLEQR VAALEGGVAA LAVASGQAAS AFALQNLARV GDNVVSSTDL YGGTWNLFAN
TLKDQGIEVR FVDPSDPQAF ERATDERTRA YYAETLPNPK LAVFPIEEVA AIGRKHGIPL
IVDNTAAPLL VKPLEHGAAI VVYSATKYLG GHGTSIGGLI VDGGNFPWEQ FPQRQPALNT
PDPSYHGAVW VEAVKPIGPV AYIIKARTTL LRDLGSALSP FNAFQIIQGL ETLPLRIERH
VQNAQKVADY LEKRPEVVKV IHPSKQSGVA RERAEKYLQG KFGGLVGFEL AGGREAGRKF
IDALELLYHV ANIGDARSLA IHPASTTHSQ LSTEEQLATG VSDGYVRLSI GLEHIDDILA
DIDRGLAAGR LANAA