| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4704 |
|---|
| Symbol | |
|---|
| ID | 6412390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5062605 |
|---|
| End bp | 5063411 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642714583 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_001993670 |
|---|
| Protein GI | 192293065 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.868333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGAT CACAGGTTGT TGCAGAGCAT TTGCCCTTGC TGCGCCGCTA TGCGCGCGCG
CTAACCGGTA GCCAGACCTC CGGTGACGCC TATGTTGGCG CCATGCTGGA GGCATTGCTC
CAGGATCCGG CCCTGCTCGA CGAGCGGCAC GGTCCCCGTC CGGGTCTTTT CCGTTTGTTT
ACCCAGATTT GGAACTCCGT CGCCCTGAAC GACGACGCAG ACGTCCGAAC CCTGCCGATG
CCGTCGGAGC GGCGGCTGTC GGCGATCACG CCGCTGCCGC GCCAGGCGTT TCTGCTGCTG
TCGCTGGAAG GCTTTTCCGA AGAGGAAGTC GCCTTCGTGC TCCAGGTCGA TGTCGCCGAG
GTCCGGCAGC TGGTCGAGAC CGCCGGCAAG GAGATGGCCG AAGAGATCGC CACCGACGTC
CTGATTATCG AGGACGAGAC CTTCATCGCG ATGGATCTCG AGAGCCTCAT CAAGGGCTTG
GGCCACAACG TCATCGGTGT TGCCCGGACC CATGCGGACG CGATCGCGCT CGCGAAGACG
CAGAAGCCAG GTCTGATTCT GGCGGATATT CAGCTCGCCG ACGGCAGCTC CGGCCTGGAT
GCGGTGAACG AGCTGCTGCG AACCTTCGAA GTGCCGGTGG TGTTCATCAC GGCTTATCCG
GAGCGTTTCC TCACTGGTGA ACGTCCCGAG CCCGCCTTCC TGATCTCCAA GCCGTTCCAG
CCGGCGATGG TGTCAGCAGT GGCGAGCCAG GCGCTGTTCT TCCAGCGCAA CTCCCGAAAC
CGGAAGCCCA GCGCTGTCGC ATCCTGA
|
|---|
| Protein sequence | MSRSQVVAEH LPLLRRYARA LTGSQTSGDA YVGAMLEALL QDPALLDERH GPRPGLFRLF
TQIWNSVALN DDADVRTLPM PSERRLSAIT PLPRQAFLLL SLEGFSEEEV AFVLQVDVAE
VRQLVETAGK EMAEEIATDV LIIEDETFIA MDLESLIKGL GHNVIGVART HADAIALAKT
QKPGLILADI QLADGSSGLD AVNELLRTFE VPVVFITAYP ERFLTGERPE PAFLISKPFQ
PAMVSAVASQ ALFFQRNSRN RKPSAVAS
|
|---|
| |