Gene Rpal_4654 details

Gene Information

• Locus tag: Rpal_4654
• ID: 6412340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 5015604
• End bp: 5016092
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 642714533
• Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
• Protein accession: YP_001993620
• Protein GI: 192293015
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
• TIGRFAM ID: [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.910069
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCTC CCGTCGCGAT CATCATGGGC AGCCAGTCGG ACTGGGAAAC GATGCGGCAC 
GCCGCCGACA CCCTGACCGC CCTCGGCGTC GCCCATGACA CCCAGATCGT TTCCGCGCAC 
CGCACCCCCG ACCGCCTTTA TGCTTTCGCC AAAGGCGCAA AGGCAGCCGG CCACCGCATC 
GTCATTGCCG GCGCCGGCGG GGCGGCGCAT CTGCCGGGTA TGACCGCGGC GCTGACGGAG 
CTGCCGGTGT TCGGCGTGCC GGTCGAATCC AAGACCATGT CTGGCCTGGA TTCGCTGTAT 
TCGATCGTGC AGATGCCGGC CGGCATCCCG GTCGGCACGC TGGCGATCGG CAAGGCCGGC 
GCGGTCAACG CGGCGTTGCT GGCCGCGAGC GTGCTGGCCC TGACCGATTC CGATCTGGCG 
ACCCGGCTGG CGGCGTGGCG CAAGGCGCAG ACCGATTCGG TTGCGGCCCG GCCGGAGGGC 
GCGGCGTGA 

 

Protein sequence

MTAPVAIIMG SQSDWETMRH AADTLTALGV AHDTQIVSAH RTPDRLYAFA KGAKAAGHRI 
VIAGAGGAAH LPGMTAALTE LPVFGVPVES KTMSGLDSLY SIVQMPAGIP VGTLAIGKAG 
AVNAALLAAS VLALTDSDLA TRLAAWRKAQ TDSVAARPEG AA