| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4650 |
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| Symbol | |
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| ID | 6412336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5012356 |
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| End bp | 5013558 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642714529 |
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| Product | putative ABC transporter (substrate-binding protein); putative branched-chain amino acid transporter |
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| Protein accession | YP_001993616 |
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| Protein GI | 192293011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGA CGACCGCGCG GGCATTGCTC GCCGTATCAC TCGGTCTGAT CGGCACGGCC
GCATCGGCCG AGGATCAACC GGGGATCACC CAGACCGAAA TCCGCATCGG GCAGACCATG
CCTTATAGCG GGCCGGTTTC GGCATTCGGG ATTCTCGGCA AGGGCGAACT CGCTTACTTC
AAGATGGTCA ATGATCGCGG CGGCATCAAC GGCCGCAAGA TCAACCTGAT CTCGCTCGAC
GACGGCTACG TGCCGCCGAA GACGGTGGAG CAGACCAGAC GACTGGTGGA AAGCGACGAA
GTCTCGTTCA TCTTCTCCAC CATGGGCACC GCGCACAACA CCGCGATCGC CAAATATCTG
CAAAACAAGA AGGTGCCGCA GCTGTTCGTC GCTTCCGGCG CCTCCAAATT CGGCGACATC
TCGCAGTACC CGCTCGCCAT CATGGGCATC ATGGCGCCGT TCCGCAACGA AGCGAGAATG
TACGCCCGCT ACGCCCTGGA GAAGAAGCCG GACGCCACCT TTGCGGTGAT CGCACAGAAC
GACGATTTCG GCCGCGACTA TCTTGCCGGG CTGCGCGACG TGCTCGGCGA GCGCTACGAC
AAGGCGGTGA CCGCAAGCAT GTACGAAGTC ACCGACCCGA CCATCGACTC GCAGATCGTC
AGCCTGAAAG CCAGCGGCGC CGATGCGCTG ATCATCGCCG CGACACCAAA GTTCGCCGCG
CAGGCGATCC GCAAGACGTT CGAGATCGGC TGGAAGCCGA TGAGATTCCT GTCCAACGTC
TCGGTGTGGA TGTCGTCGGT GATGGAGCCG GCCGGCGTCG ATGCCGGCGT CGGCATCATC
TCGACTGCCT ACGTCAAAGA TCCGCTCGAT CCCGCCTGGG CCAACGATCC CGGCGTGAAG
GATTGGCGAG CCTACATGCA GAAGTACATC CCGGACGGAG ACTTGCGCGA TTCCAACTAC
GTCAACGGCT ACAACAACGG CATGGTTCTC GAACATGTGC TGAAGGCGGC CGGCAACGAT
CTCAGCCGCG ACAACATCAT GAAGCAGGCG CTCTCGATCA AAGAGCTGGA GTTGCCGATG
CTGCTGCCGG GCATCAAGGT TCAGACTGCG GCCGACGACC ACCTTCCGAT CGAGCAGGTC
CAGTTCATGC GCTTCACCGG CAAGCAATGG GAACGGTTCG GAGAGGTGCG CTCGACCAAG
TAA
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| Protein sequence | MRMTTARALL AVSLGLIGTA ASAEDQPGIT QTEIRIGQTM PYSGPVSAFG ILGKGELAYF
KMVNDRGGIN GRKINLISLD DGYVPPKTVE QTRRLVESDE VSFIFSTMGT AHNTAIAKYL
QNKKVPQLFV ASGASKFGDI SQYPLAIMGI MAPFRNEARM YARYALEKKP DATFAVIAQN
DDFGRDYLAG LRDVLGERYD KAVTASMYEV TDPTIDSQIV SLKASGADAL IIAATPKFAA
QAIRKTFEIG WKPMRFLSNV SVWMSSVMEP AGVDAGVGII STAYVKDPLD PAWANDPGVK
DWRAYMQKYI PDGDLRDSNY VNGYNNGMVL EHVLKAAGND LSRDNIMKQA LSIKELELPM
LLPGIKVQTA ADDHLPIEQV QFMRFTGKQW ERFGEVRSTK
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