| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4634 |
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| Symbol | |
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| ID | 6412320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4994804 |
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| End bp | 4995454 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714513 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001993600 |
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| Protein GI | 192292995 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGGA CCCGCGAACA GATGGCCGCG CGCGCCGCCA AGGAATTGCG CGACGGCTTC
TACGTCAACC TCGGCATCGG CATTCCGACG CTGGTCTCCA ACTACATCCC GGACGGCGTT
GACGTGGTGC TGCAGAGCGA GAATGGCATG CTCGGCATGG GCCCGTTCCC CTATGAGGGT
GAAGAAGACC CCGACCTGAT CAACGCCGGC AAGCAGACCG TCACCGAGCT GCCGTCGACC
AGTTACTTCT CGTCGGCCGA TTCCTTCGCG ATGGTTCGCG GCGGCCACAT CGACCTCTCC
ATTCTCGGCG CCATGCAGGT CGCGCAGAAC GGCGACCTCG CCAACTGGAT GATTCCGGGC
AAGATGGTGA AGGGCATGGG CGGCGCGATG GATCTCGTCG CCGGCGTGAA GCGCGTCGTC
GTGGTGATGG AGCATTCCGC CAAGGACGGC CCGAAGCTGT TGAAGACGTG CAACCTGCCG
CTCACCGGCG AACGCGTCGT CGACATGGTG GTCACCGACT TGGCCGTGTT CACCATCGAC
AAGCACGGCA ATGACGGCAT GGCGCTGATC GAGCTCGCCG ATGGCGTCAC GCTCGATGAG
GTCAAGGCCA AGACCGAAGC CGAATTCCGC GTCGCGCTGA AGAACGCTTA G
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| Protein sequence | MAWTREQMAA RAAKELRDGF YVNLGIGIPT LVSNYIPDGV DVVLQSENGM LGMGPFPYEG
EEDPDLINAG KQTVTELPST SYFSSADSFA MVRGGHIDLS ILGAMQVAQN GDLANWMIPG
KMVKGMGGAM DLVAGVKRVV VVMEHSAKDG PKLLKTCNLP LTGERVVDMV VTDLAVFTID
KHGNDGMALI ELADGVTLDE VKAKTEAEFR VALKNA
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