Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4617 |
Symbol | |
ID | 6412303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4976068 |
End bp | 4976451 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714496 |
Product | phasin |
Protein accession | YP_001993583 |
Protein GI | 192292978 |
COG category | [S] Function unknown |
COG ID | [COG5490] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01985] phasin |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGG AAGAGCGTGA TCGGTTCGAG ATTCCCAAGG AAGTGCGCTC GATGGCCGAG GCCGGATTCG ATCAGGCCCG CAAGGCGTTC GAGCACATGC TGTCCAGCGC CCAGCAGACG GCCGCCACCA TCGAGGATCG CGGCGCCGCC GCCCGGGCCA ACGCCAAGGA GATCACCGGC CGCGCCGTCA GCTTCGCCGA GCGCAACGTT CACGCCGCGC TCGATTACGC CCAGCAGCTC GTCCACGCCA AGGATCTCGG CGACGTGATG CGGGTCCACA GCGAATACGT CCAGTCGCAG ATGAAGGCGT TTGCCGAGCA GGCGAGCGAG ATCGGTCAGG TCGTCAGCAA GGCGGCGCAG GACGTGACCA AGCCCAAGAG CTAA
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Protein sequence | MDQEERDRFE IPKEVRSMAE AGFDQARKAF EHMLSSAQQT AATIEDRGAA ARANAKEITG RAVSFAERNV HAALDYAQQL VHAKDLGDVM RVHSEYVQSQ MKAFAEQASE IGQVVSKAAQ DVTKPKS
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