| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4392 |
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| Symbol | |
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| ID | 6412076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4720074 |
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| End bp | 4720811 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642714274 |
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| Product | nuclear protein SET |
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| Protein accession | YP_001993363 |
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| Protein GI | 192292758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2940] Proteins containing SET domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.304271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGT TGTCGAATGA CCATTACCGC GTCGGCCGCT CCAAAACCGG GCTCGGCCTG
TTCGCCCTCA AGCCGATCAA GAAGGGCGCC AAGATCATCC GGTATTTCGG ACCGCTGCTC
GACGCGCACA ACAAGAAGCA CGACGGCATT GAGAACAAAT ACCTGTTCGA GCTGAACAAG
CGCTGGACCA TCGACGGCTC GGTGCGCAAG AACGTCGCGC GCTACATCAA CCACGCCTGC
AAGCCGAACG CGGAGTCCGA CGTCAATCCG CGCAAGAAGC GCGTGATCAT CCGCGCCATC
AAGAACATCG AGCCCGGCGA AGAGATCAAC TACGATTACG GCACCGATTA CTTCAAAGCC
TATCTGAAGC CGATCGGCTG CAAGTGCGTC TCTTGCGAAA AGAAACGCAA GAAGAAGGCC
GCCGAAGCCC GCGCCGAGAA GGCCAAGCTG AAGCTGAAGG CCGAGCGCAA GGCGCAAGCC
GAAGCCGAGA AGGCCGCCCG CAAGGCCGCG AAGGCTGCCG GCAAGGAGAA GCCGGAAAAG
CCGTCGAAGC CGGAGAAGGT CGCCAAGTCG AAGGCGCCGA AAGCGGTCAA GGCTAAAACG
ACGGCGAAGC CGAAGGGCGC CAGCAAGGCG GTGAAGACGA AGGTCGTGAC GGCAAAGGCC
GGTAAGACCA AAGCGGCGCA GCCGGCCAAG ACCACGTCGT TGCGGAAGAC GGCTGCGAGC
AAATCCAAGG CAGCCTGA
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| Protein sequence | MPLLSNDHYR VGRSKTGLGL FALKPIKKGA KIIRYFGPLL DAHNKKHDGI ENKYLFELNK
RWTIDGSVRK NVARYINHAC KPNAESDVNP RKKRVIIRAI KNIEPGEEIN YDYGTDYFKA
YLKPIGCKCV SCEKKRKKKA AEARAEKAKL KLKAERKAQA EAEKAARKAA KAAGKEKPEK
PSKPEKVAKS KAPKAVKAKT TAKPKGASKA VKTKVVTAKA GKTKAAQPAK TTSLRKTAAS
KSKAA
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