| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4320 |
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| Symbol | |
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| ID | 6412004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4647917 |
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| End bp | 4649518 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714202 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_001993291 |
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| Protein GI | 192292686 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0303] Molybdopterin biosynthesis enzyme
[COG2068] Uncharacterized MobA-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCG GCCCGCGCCG TCCGGCCGAT GCGATCGGCG GCGTCACCGT GCATTCGCTG
CGGCAGAACG GTCTGCTGCT GAAGAAGGGC ACGACGATCG GCCCGGCTGA AGTTGCCGCG
CTGGAGAAGG CCGGCATCGC CGAGATCGTG GTGGTCCAGC TCGAACCCGG TGACGTGTCC
GAGGATGTCG CGGCTGCGGA TGTCGCGGGC GCGGTCGCCG GCGATGGCGT CACGGTGGAT
CGCGCGTTCA CCGGCCGCGC CAATCTGTTC GCGGGACGGA CCGGCGTCTT GGTGATCGAT
CGCGCGGTGG TCGATCGCAT CAATGCGGTC GACGAGGCGA TCACTTTGGC GACCCTGCCG
GCGTTCAAGC CGGTCGTCGA AGGCGAGATG GTCGCCACCG TCAAGCTGAT CCCGTTCGGC
GTCGCGAGCC GGCTGCGCGA CGCCGCGGTG GCGGCAGCGG AGGGCAGCGC ACTACGCGTG
GCGCCTTACG TGATCAAGCG CGTCGGCGTG GTGTCGACGC TGCTGCCCGG ACTCGCCCCT
AAGGTGGTCG ACAAGACCCT CCGCGTCACC GCCGAGCGGC TGGCGCCGGC CGGTGCCGAG
ATTATCGCCG AGCGCCGCGT CGCGCATGAA GAGGCCGCGC TGTCGGCCGC GATCAAGGAG
CTACTTGGCC TCGGCGCCGA GATGGTGATC GTGTTCGGCG CCTCGGCGAT CGCCGACCGC
CGCGACGTGA TCCCGGCGGC GATCGGGACC GTCGGCGGCA CGATTTCGCA TTTCGGCATG
CCGGTCGACC CGGGCAATCT CTTGCTGGTC GGCTCGATAT CCGGTGTGCC GGTGCTGGGC
GCGCCGGGCT GCGCGCGCTC GCCGGTCGAG AATGGTTTCG ACTGGGTGCT GATGCGGCTG
CTCGCCGGTC TCACCGTCAC CCGAGCCGAC ATCACCGCGA TGGGTGTCGG CGGCCTGTTG
ATGGAGATCG TGACGCGGCC GCAGCCGCGC GTCCCGGTCG CGGAAAGCGG CCGCAACGTC
GCGGCGATCG TGCTCGCCGC TGGGCGTGGC ACACGGATGG GCGGGCCGAA CAAACTGCTC
GCCGACCTCA ACGGCAAGCC GCTGGTGCGG ATCGTCGCCG AGCAGGCGTT GGCTTCGCAG
GCCGCACGCA CCATCATCGT CACCGGCCAT CAGGCCGGCG AGGTCGAAGC GGCGCTGCAC
GGGCTCGATC TCACCTTCGT GCACAATCCG GACTTCGCCC AAGGCATCGC GTCGTCGGTG
AAGACCGGCA TCGCGGCGCT CGGCGAGGAT GCCGACGGCG CGATCGTCTG TCTCGGCGAC
ATGCCGCTGA TCGACGCCGC GCTGATCGAT CGGATGATCA CAGCGTTCGA TCCCGATCGC
GGCGCGCTGA TCGTAGTGCC GGTCGCAGAG GGGCGCCGCG GCAATCCGGT GCTGTGGTCG
CGGCGGTTCT TTGCCGAGCT GATGACGCTC GGCGGCGACG TCGGCGCGCG GCATCTGATC
GCCAAGCATG GCGAAGCGGT GACTGAAGTG CCGGTCGAAG GTGAGGCGGC ATTCCTCGAC
ATCGACACCC CGCAAGCGCT CGATGAGGCG CGGCGCGGCT AA
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| Protein sequence | MKFGPRRPAD AIGGVTVHSL RQNGLLLKKG TTIGPAEVAA LEKAGIAEIV VVQLEPGDVS
EDVAAADVAG AVAGDGVTVD RAFTGRANLF AGRTGVLVID RAVVDRINAV DEAITLATLP
AFKPVVEGEM VATVKLIPFG VASRLRDAAV AAAEGSALRV APYVIKRVGV VSTLLPGLAP
KVVDKTLRVT AERLAPAGAE IIAERRVAHE EAALSAAIKE LLGLGAEMVI VFGASAIADR
RDVIPAAIGT VGGTISHFGM PVDPGNLLLV GSISGVPVLG APGCARSPVE NGFDWVLMRL
LAGLTVTRAD ITAMGVGGLL MEIVTRPQPR VPVAESGRNV AAIVLAAGRG TRMGGPNKLL
ADLNGKPLVR IVAEQALASQ AARTIIVTGH QAGEVEAALH GLDLTFVHNP DFAQGIASSV
KTGIAALGED ADGAIVCLGD MPLIDAALID RMITAFDPDR GALIVVPVAE GRRGNPVLWS
RRFFAELMTL GGDVGARHLI AKHGEAVTEV PVEGEAAFLD IDTPQALDEA RRG
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