Gene Rpal_4306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4306 
Symbol 
ID6411990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4636877 
End bp4637683 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID642714188 
Productprotein of unknown function DUF72 
Protein accessionYP_001993277 
Protein GI192292672 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG CTCAGGCAGG CGACATCCGG ATCGGCATCG GCGGCTGGAC CTACGAGCCG 
TGGCGCGGAG TGTTCTATCC GGACAAGTTG CCGCAGCGGC GGGAGCTTGA ATACGCCGCC
TCCAAGCTGA CCTCGATCGA GATCAACGGC ACCTTCTATG GCTCGCAGAA GCCGGAGAGT
TTCCGCAAAT GGGCCAGCGA GGTCCCGGAC GACTTCGTGT TTTCGCTGAA GGGACCGCGG
TTCGCGACCA ACCGAAAAGT GCTGGCGGAA GCCGGCGACA GTATTGAACG ATTCTACCAT
TCAGGCGTGC TCGAACTCGG AGACCGGCTC GGTCCGGTGC TGTGGCAGTT CGCGCCGACC
AAGAAGTACG ACGAAGCCGA CTTCGGCAAA TTCCTCGAGC TGCTGCCGCG GGAGATCGAC
GGCCGCACGC TGCGGCACGT CGTCGAAGTT CGTCATGACA GTTTCAAGAC GCCGGCGTTC
GTCGCGCTGC TGCGCGAGCA CAACATTCCG GTCGTGTACT CCGAGCACGC GACCTATCCT
GAGATCGCCG ACGTCACAGG TGATTTCGTC TATGCACGGT TGCAAAAGGG CAAGGATGAC
ATCGCCACCG GCTATCCGCA GAAGGCGCTT TCGGCATGGG CCAAGCGGCT GCAACTCTGG
GCCGGCGGCG GCGAGCCCGA CGATCTGCCG AAGGTCGACG CGTCGGCGGC AAAGCCGCAC
AAGCGCGACG TGTTTGCCTA TGTGATTCAC GAAGGCAAGG TGCGCGCGCC CGCTGCCGCG
ATGGAACTGA TCAAACTCGT CGGCTAA
 
Protein sequence
MKKAQAGDIR IGIGGWTYEP WRGVFYPDKL PQRRELEYAA SKLTSIEING TFYGSQKPES 
FRKWASEVPD DFVFSLKGPR FATNRKVLAE AGDSIERFYH SGVLELGDRL GPVLWQFAPT
KKYDEADFGK FLELLPREID GRTLRHVVEV RHDSFKTPAF VALLREHNIP VVYSEHATYP
EIADVTGDFV YARLQKGKDD IATGYPQKAL SAWAKRLQLW AGGGEPDDLP KVDASAAKPH
KRDVFAYVIH EGKVRAPAAA MELIKLVG