Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4298 |
Symbol | |
ID | 6411982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4626557 |
End bp | 4627258 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714180 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001993269 |
Protein GI | 192292664 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.530374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCAC TGCGCATGAC CAGCGACTTG CGCCGGGAAT TGATCCTGGG CGCAGCCAAG CGTTGCTTTG CCCGGAATGG CTTTGCAGGG ACCACCACCA AGAGCGTCGC GGCCGCCGCG TCGATCTCGG AAGGGTTGCT GTTCAAGCAT TTCCCGAGCA AGGCGGCGCT GTATGCCGAG ATCCTGGCGT GCGAGCGTGA AGCCGATCCG GCCTTGATGG ACCTGCTCGG CGCCGAGCCC TCGACCCAGA CGCTGGTGGT GCTGGTGCGG GAGATGGTGG AGCACTTCCT GCATGCCTCC GATCAACCGG AGCAGGAGGA GGACCAGCGG CTGCGGCTGT TGGTCTCGAG CCAGCTCGAT GACGGCGAGT TTGCCCGTCT GGTGTACGAG AAGGTCGCCG GGCTGATCGG GCGGACCTTC GTGTCGTCGC TGGAGCGGGC GGTGGAAGCG GGCGACGCGG TGCGGATCGG CAACGAACCG ATGAACCTGT TCTGGTTCGC CCACCACACC TTGCTGATGG CGGCGCTGGC GCGGCTGCCG TCGGTGCCGT GCCTGAGCTA CGGCGACGCC GCGAGTCACG AGCGCCAGAT GTGTGAATTC ATTCTACGTG GAATTGGTCT GAACGAAGCC GTAATTGCCG CCCATCTCGA CCGCGAATTG TCGCCGGGCC GGATAAAGGC GGAAACGACA GAAAGTGCAT GA
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Protein sequence | MTSLRMTSDL RRELILGAAK RCFARNGFAG TTTKSVAAAA SISEGLLFKH FPSKAALYAE ILACEREADP ALMDLLGAEP STQTLVVLVR EMVEHFLHAS DQPEQEEDQR LRLLVSSQLD DGEFARLVYE KVAGLIGRTF VSSLERAVEA GDAVRIGNEP MNLFWFAHHT LLMAALARLP SVPCLSYGDA ASHERQMCEF ILRGIGLNEA VIAAHLDREL SPGRIKAETT ESA
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