| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4276 |
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| Symbol | |
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| ID | 6411960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4603725 |
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| End bp | 4604501 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714158 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001993247 |
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| Protein GI | 192292642 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0400534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACA AGGTGAAACA ACTCTGGGCC GACGGCAAAG TCGTGGTCAA TGGCTGGCTG
GCGATTCCGT CGGGGTTTTC GGCCGAGGTG ATGGCGCAGT GCGGGTTCGA CAGCGTCACG
GTCGATATCC AGCACGGCGT GCAGGACTAT CAATCGATGG TCACCTGCTT CCAGGCGATG
CAGGCGCATC CGGTGACGCC GATGGTGCGG GTGCCGTGGA ACGAGCCGGG CATCATCGGC
AAGGTGCTGG ACGGCGGCGC CTACGGGGTG ATCTGCCCGA TGGTGAATAC CAAGGAGGAA
GCCGAAAACT TCGTCCAGTA TTGCAAGTAC CCGCCGCGCG GCACCCGCAG CAACGGACCG
ATCCGTGCCG GGCTGTACGG CTCGTCCGGC AATTATCAGG CGACCGCGAA CGACGAGACG
CTGTGCATCC CGATGATCGA GACCCGCACC GCGGTCGAGA ACATGGAGTC GATCCTCGAC
GTCGAAGGCA TTGCCGGCGT GTATATCGGG CCCAGCGATC TCGGCTTCTC CTACGGCCTG
GTGCCGAAGC TCGACCGCGA CGAGCCGGAG ATCCTGAAGA TCTACGACAA GCTGCTCAAG
GAATGCGACA AGCGCGGCCT GTATCCGGGC ATCCACTGTT CCGGCCCGGA AGGCGCCGCT
CGCAACATCG CCCTCGGCTT CAAGCTGGTG ACGCTGCTCA ACGACAGCGG CATCATGGCG
ATCGGCGCCC GCAGCTGGGT CGCCGAGACG CGGAAGAACT CGGGCGGCAA GGCGTGA
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| Protein sequence | MANKVKQLWA DGKVVVNGWL AIPSGFSAEV MAQCGFDSVT VDIQHGVQDY QSMVTCFQAM
QAHPVTPMVR VPWNEPGIIG KVLDGGAYGV ICPMVNTKEE AENFVQYCKY PPRGTRSNGP
IRAGLYGSSG NYQATANDET LCIPMIETRT AVENMESILD VEGIAGVYIG PSDLGFSYGL
VPKLDRDEPE ILKIYDKLLK ECDKRGLYPG IHCSGPEGAA RNIALGFKLV TLLNDSGIMA
IGARSWVAET RKNSGGKA
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