| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4270 |
|---|
| Symbol | |
|---|
| ID | 6411954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4592818 |
|---|
| End bp | 4594200 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642714152 |
|---|
| Product | Ethanolamine ammonia lyase large subunit |
|---|
| Protein accession | YP_001993241 |
|---|
| Protein GI | 192292636 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4303] Ethanolamine ammonia-lyase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.984943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATC GCCACAGCAT CGGCAACGTC TCGTTCGTGT TCGAAGACCT GCGCGACCTG
CTCGCCAAGG CGAGCCCGCC GCGCTCCGGC GATCGCCTCG CCGGAATCGC GGCTGACAGC
GCCGAGCAGA TGGTGGCGGC GCGGATGGCG CTGGCGAACC TGCCGCTGCG GCAATTTCTC
TCCGAAATGG TGATCCCGTA CGAAGCCGAC GAGGTGACGC GGCTGATCGC GGACCGTCAT
GACGCAGCGG CGTTCGCGCC TGTGGCCTCG CTCACCGTCG GCGGCTTCCG CGACTGGCTG
CTGTCGGACG CCGCGACGCC TGTGGCGCTG GCTGCGCTGG CGCCGGGCCT GACGCCCGAG
ATGGTCGCCG CGGTGTCGAA GCTGATGCGC AATCAGGATC TGATCCTGGT GGCGAAGAAG
TGCAGCGTGG TCACCCGCTT CCGCAACACC ATCGGATTGC CTGGGCGGAT GAGTGTGCGG
CTGCAGCCCA ACCATCCTTT CGATGATGCC CGCGGCATCA CCGCGTCGAT TATCGATGGC
CTGCTGCTTG GTGCCGGCGA CGCCTGCATC GGCATCAATC CGGCGAGCGA CGATCCGGCG
GTGCTCGGCC AATTGGTGCG GCTGCTCGAC GACATCATCG CGCACCTGGC AATTCCGACC
CAGGGTTGCG TGCTGACCCA CGTCACCACC ACGCTGCGCC TGATCGAGCA GGGCGCGCCG
GTCGATCTGA CGTTCCAGTC GATCGCCGGC ACAGAAGCCG CCAACCGCAG CTTCGGCATC
GATCTGGCGC TGCTCGCCGA AGCCCATCAG GCGACGCTGG CGCAGAAGCG CGGCACGGTC
GGCGACAACG TGATGTATTT CGAGACCGGG CAGGGCTCGG CGCTGTCGGC GAATGCGCAT
CACGGCGTCG ATCAGCAAAC CTGCGAGGCA CGGGCCTATG CGGTGGCGCG GGCATTCTCG
CCGTTGCTGG TGAACAGCGT GGTCGGCTTC ATCGGTCCGG AATATCTGTA CGACGGCAAG
CAGATCGTGC GCGCCGGCCT TGAGGATCAT TTCTGCGGCA AGCTGCTTGG CCTGCCGCTC
GGGGTCGACA TCTGCTACAC CAACCATGCC GAAGCGGATC AGGACGACAT GGACACGCTG
CTCACGCTGC TTGCAGCCGC CGGCGTCAAT TTCATCATGG GCGTGCCGGG CGCCGACGAC
GTGATGCTGA ACTATCAGTC GACCTCGTTT CACGATGCGC TGTATGTCCG CGATCTGTTC
GGCCTGAAGC GCGCGCCGGA ATTCGACGAC TGGCTTGTCC GTGCCGGTTT TTCCGGTCCC
GATCACCGTC CACTGACGGA TGGTGCCCTG CTGCCGGAAA TCGCGGCGCG GCTGATCGCC
TGA
|
|---|
| Protein sequence | MIYRHSIGNV SFVFEDLRDL LAKASPPRSG DRLAGIAADS AEQMVAARMA LANLPLRQFL
SEMVIPYEAD EVTRLIADRH DAAAFAPVAS LTVGGFRDWL LSDAATPVAL AALAPGLTPE
MVAAVSKLMR NQDLILVAKK CSVVTRFRNT IGLPGRMSVR LQPNHPFDDA RGITASIIDG
LLLGAGDACI GINPASDDPA VLGQLVRLLD DIIAHLAIPT QGCVLTHVTT TLRLIEQGAP
VDLTFQSIAG TEAANRSFGI DLALLAEAHQ ATLAQKRGTV GDNVMYFETG QGSALSANAH
HGVDQQTCEA RAYAVARAFS PLLVNSVVGF IGPEYLYDGK QIVRAGLEDH FCGKLLGLPL
GVDICYTNHA EADQDDMDTL LTLLAAAGVN FIMGVPGADD VMLNYQSTSF HDALYVRDLF
GLKRAPEFDD WLVRAGFSGP DHRPLTDGAL LPEIAARLIA
|
|---|
| |