| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4250 |
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| Symbol | |
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| ID | 6411934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4566392 |
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| End bp | 4567564 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714132 |
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| Product | amidohydrolase |
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| Protein accession | YP_001993221 |
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| Protein GI | 192292616 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.456638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTGA TCAACCGCGT CGCCGATCTG CAGCCCGACA TCGCGGCCTG GCGCCGCACG
CTGCATCAGC AGCCGGAGCT GATGTACGAC GTCGAAGGCA CAGCGGCGTT CGTCGCCGAA
CGGTTGCGCG AATTCGGCTG TGACGAGGTC GTCACCGGGC TCGGCCGCAC CGGCGTGGTC
GGGGTGATCC GTGGCGCGCG GCCAGCCGGC ACCGGCGATC TCAAGGCGAT CGGGCTGCGC
GCCGACATGG ACGCGCTGCC GATCGTCGAG GCGACAGGAT TGCCTTATGC CTCCAAGGTG
CCCGGCAAGA TGCACGCCTG CGGCCACGAC GGTCACACCG CGATGCTGCT CGGCGCCGCG
CGCTATCTCG CCGAGACTCG CAACTTCGCC GGCGATGCGG TGATGATTTT TCAGCCGGCC
GAGGAGGGCG GTGCCGGCGC CGCGGCGATG ATCGACGACG GCCTGATGGA GCGGTTCGGC
ATCGAGCAGG TGTACGGCAT GCACAACGGT CCCGGCATTC CGGTCGGCGC GTTCGCGATC
AGCCCGGGAC CGGTGATGGC GGCGACCGAT GCGATCGATA TCCGCATCGA AGGCCATGGC
GGCCACGCTG CGCGGCCGCA TCTGTGCGTC GATCCGGTGC TGGCGGGCGC GCAACTGATC
ACCGCGCTGC AGGGCATCGT GTCGCGCAAC GTTGATCCGT TCGAAGCCGC GGTGGTGTCG
ATGTGCGAAT TCCACGCCGG CAACGCCCGG AACGTGATTC CCCAATATGC CGAGCTGAAG
GGCACGGTGC GGACGATGAC GGCCGAGGTA CGCGACATGG TCGAGCAGCG CGTGCGCGAT
GTCGTCGCCG GCGTCGCGCA GCTGACCGGC ACAAGGATCG AGCTCACCTA CGAGCGCGGC
TATCCGGTGC TGGTCAACCA CATGGCGGAG ACCGACGTGG CGATCCAGGT CGCGCGCGAC
GTCGCCGGCG AGGCCAATGT GGTGCCGCTG CCGCCGCTGA TGGGCGCCGA GGATTTCGCC
TACATGTTGG AGAAACGGCC GGGCGCGTTC GTGTTCATCG GCAACGGCGA CAGCGCCGGG
CTGCATCACC CGGCCTACGA CTTCAACGAC GAGGCGATCG TGTACGGCAC CTCGTACTGG
GTGCGGCTGG TGGAGACCCA GCTGGCGGCG TGA
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| Protein sequence | MPVINRVADL QPDIAAWRRT LHQQPELMYD VEGTAAFVAE RLREFGCDEV VTGLGRTGVV
GVIRGARPAG TGDLKAIGLR ADMDALPIVE ATGLPYASKV PGKMHACGHD GHTAMLLGAA
RYLAETRNFA GDAVMIFQPA EEGGAGAAAM IDDGLMERFG IEQVYGMHNG PGIPVGAFAI
SPGPVMAATD AIDIRIEGHG GHAARPHLCV DPVLAGAQLI TALQGIVSRN VDPFEAAVVS
MCEFHAGNAR NVIPQYAELK GTVRTMTAEV RDMVEQRVRD VVAGVAQLTG TRIELTYERG
YPVLVNHMAE TDVAIQVARD VAGEANVVPL PPLMGAEDFA YMLEKRPGAF VFIGNGDSAG
LHHPAYDFND EAIVYGTSYW VRLVETQLAA
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