Gene Rpal_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4215 
Symbol 
ID6411899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4521109 
End bp4521663 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID642714097 
Productcytochrome c class I 
Protein accessionYP_001993186 
Protein GI192292581 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.26019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTT TCGAACTCAA CAAAATTGTC GGCGCGATCT TCGGGACCTT GCTGATCCTG 
CTGCTGTCCA ATTTCACCGC CCAGGCGATC TTCTCTCCGA CCAAGCCTGA AAAACAGGGC 
TATGCCATCG TAGTGAAGGA AGCCGAGCCG GCGCAGGCGA AGGATGCTGC GCCGAAGGCG 
GACGAGCCGA TCGAGAAGCT GCTGCAGACC GCCTCGGTCG ATCAGGGCTC CAAGGTCGCC 
AAGAAGTGCG CGGCCTGCCA CACCTTCGAG AAGGACGGCC CAAACCGCGT CGGCCCGAAC 
CTCTACGGCA TCGTCGGCGA CCATCGCGGC GAAGGCCGAA ACGGTTTCAA TTTCTCGGCT 
GCGATGAAGG CCAAGGGCGG CGCCTGGACG TTCGACGAGC TCAACAAGTT CCTTGCGAAC 
CCGAAGGGCT ACATTCCGGG CACCGCGATG AGCTTCGCCG GCGTCCCGAA CGACAAGGAA 
CGGGCCGACC TGATCGCCTA TCTCAACAAG AATTCCGACA AGCCCGAGGC GCTGCCGGCG 
ACGGCCGAGA AGTAA
 
Protein sequence
MDTFELNKIV GAIFGTLLIL LLSNFTAQAI FSPTKPEKQG YAIVVKEAEP AQAKDAAPKA 
DEPIEKLLQT ASVDQGSKVA KKCAACHTFE KDGPNRVGPN LYGIVGDHRG EGRNGFNFSA 
AMKAKGGAWT FDELNKFLAN PKGYIPGTAM SFAGVPNDKE RADLIAYLNK NSDKPEALPA 
TAEK