| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4202 |
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| Symbol | |
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| ID | 6411886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4504687 |
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| End bp | 4505958 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714084 |
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| Product | putative pilus assembly protein CpaE |
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| Protein accession | YP_001993173 |
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| Protein GI | 192292568 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.195195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGTT ACTCGCGCCA AAATCAGGAC GAACCGGCGA CGGCGGCACC GGATGTAGGG
CCGGAGGAGC ACATCGCGCC AGCGCCGCGC GTCTCGGTTC AAGCGTTCTG CGAGACCGTC
GAGACCGCCG CCGCGGTGCA GGCCGCGGGC GAAGACCGTC GTCTCGCAAA AGCACACCTG
AAGATCCAAA TGGGCGGCGT GGTTGCGGCA ATCGAAGCCT ACCGATCCGC CCCGACGCCG
AACGTCATCG TGCTCGAGAC CGACGCGCGC AGCGACGTGC TGGCAGGTCT CGACCAGCTC
GCGACGGTGT GCGATCCGGG GACGCGGGTG ATCGTGATCG GCAAGGTCAA CGACGTCACG
TTGTACCGCG AGTTGGTCCG TCGCGGCGTC AGTGATTACG CGATCGCGCC GGTGCAGCCG
ATCGACGTGG TCCGCTCGAT CTGCAATCTG TTCTCGGCAC CCGAAGCCAA AGCCGTCGGC
CGCATCATCG CTGTGGTCGG TGCGAAGGGA GGCGTTGGCG CATCCACGGT CGCCCACAAC
GTGGCCTGGG CCATCGCTCG TGACCTGGCG CTGGACTCGG TGGTGGCCGA TCTCGATCTC
GCGTTCGGCA CCGCCGGGCT CGACTACAAT CAGGACCCGC CGCAGGGGAT CGCCGAGGCG
GTGTTTGCCC CCGACCGCGT CGATACCGCC TTCGTCGATC GGCTGCTGTC GAAATGTACC
GACCACCTCA GCCTGCTGGC TGCGCCGGCG ACACTGGACC GCGTCTACGA CTTTGGCGCC
GATGCATTCG ACTCGGTCTT CGACACGCTC CGCACCACGA TGCCGTGCAT TGTTCTCGAC
GTGCCGCATC AATGGACCGG GTGGGCGAAA CGGTCCCTCA TCACCGCCGA TGATATCCTG
ATCGTCGCGA CGCCCGACCT CGCCAACCTG CGCAACACCA AAAACCTGAT CGACCTCTTG
AAGGGGGCCC GGCCGAACGA TCGTCCACCG CTGTACTGTC TCAATCAGGT CGGGGTGCCG
AAGCGGCCCG AAATCTCCAC GAACGAGTTC GCCAAGGCGA TCGAGAGCCA GCCGATCGTC
TCGATTCCGT TCGAGCCTCA GATCTTCGGT GCGGCCGCCA ACAACGGCCA GATGATCGCG
GAAATCGCGG CGAACCATAA GACGACGGAG ATGTTCCTGC AGATCGCCCA GCGGCTGACG
GGACGCGGAG AAGCCAAGAA GCCGAAAGGC TCGTTCCTGG GACCGATTCT GGAGAAGCTG
CGGGCCAAGT AG
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| Protein sequence | MISYSRQNQD EPATAAPDVG PEEHIAPAPR VSVQAFCETV ETAAAVQAAG EDRRLAKAHL
KIQMGGVVAA IEAYRSAPTP NVIVLETDAR SDVLAGLDQL ATVCDPGTRV IVIGKVNDVT
LYRELVRRGV SDYAIAPVQP IDVVRSICNL FSAPEAKAVG RIIAVVGAKG GVGASTVAHN
VAWAIARDLA LDSVVADLDL AFGTAGLDYN QDPPQGIAEA VFAPDRVDTA FVDRLLSKCT
DHLSLLAAPA TLDRVYDFGA DAFDSVFDTL RTTMPCIVLD VPHQWTGWAK RSLITADDIL
IVATPDLANL RNTKNLIDLL KGARPNDRPP LYCLNQVGVP KRPEISTNEF AKAIESQPIV
SIPFEPQIFG AAANNGQMIA EIAANHKTTE MFLQIAQRLT GRGEAKKPKG SFLGPILEKL
RAK
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