| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4192 |
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| Symbol | |
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| ID | 6411876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4496366 |
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| End bp | 4497790 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714074 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001993163 |
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| Protein GI | 192292558 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAA GAACCAACCT TTTGACCTCC TTTCAGGAAT TCGGCCTCGC CGATCCGATC
GCTCGCGCTC TTCAGGAAGA AAACTACCAC ACCCCGACGC CGATCCAGGC GCAGACCATC
CCCCTCGCCC TCGCCGGCCG CGACGTCGTC GGCATTGCCC AGACCGGCAC CGGCAAGACC
GCCTCGTTCG CGCTGCCGAT CCTGCACCGC CTGCTGCAGA ACCGGATCAA GCCGGCCTCC
AAGACCTGCC GCGTGCTGGT GCTGAGCCCG ACCCGCGAGC TTTCCGGGCA GATCCTCGAC
AGCTTCAATG CCTATGGCCG CCACGTCCAT CTCAGCGCGG CGCTGGCGAT CGGCGGCGTG
CCGATGGGTC GCCAGGTTCG CAGCCTGATG GGCGGCGTCG ACGTCCTCGT CGCCACCCCG
GGCCGCCTGC TCGACCTCGT GCAGGGCAAC GCGCTGAAGC TGACCCAGGT CGAATTCCTG
GTGCTGGACG AAGCCGACCG CATGCTCGAC ATGGGCTTCA TCAACGACAT CCGGAAGATC
GTTGCCAAGC TGCCGATCAA GCGGCAGACG CTGTTCTTCT CGGCCACCAT GCCGAAGGAC
ATCGCCGACC TCGCCGAGCA GATGCTGCGC GACCCCGCCC GCGTGGCGGT GACGCCGGTG
TCCTCGACGG TGGAGCGGAT CAACCAGCGG GTGATCCAGC TCGACCATTC CGCCAAGCCG
GCCGCGCTCG CCCAGATCCT CAAGGACGAC AAGGTCAATC AGGCGCTGGT CTTCACCCGC
ACCAAGCATG GTGCCGACAA GGTGGTGAAG GGCCTCGCCC GGGCCGGTAT TACCGCCGAC
GCGATTCACG GTAACAAGTC GCAGAACTAC CGCGAGCGCG TGCTGGCGGC ATTCCGTACC
GGCGAATTGC GCACCCTGGT AGCGACCGAT ATCGCCGCGC GCGGTATCGA CGTCGACGGC
GTGTCGCACG TGGTCAACTT CGATCTGCCG AATATTCCCG AGACCTACGT CCACCGCATC
GGCCGCACCG CGCGCGCCGG AGCGGACGGC ACTGCAATCT CGCTTTGCGC CGGCGAAGAG
ATGGCGTATC TGCGCGACAT CGAAAAACTG ATCAAGGTGT CGTTGCCGAA GGAAGATCGC
CGTACCCCGG GCGCCCACGC TGCTCCCACC CCGCCCCCGC ATCGCGGCCC CCGTCAAGCG
CCCCACGGCC ATTCTCCGCG CAATGGCGAT GCACCGACGC GGGGAAAGAA TCATCGGCGC
CGCGGTCCCG CAGCCGGGCC TGCCCGCCAG TCGGACGCCA GCCGCCACGA GGCGGCGCCG
CGACCGCAGC ACGGTGGCAA CGGTGAGGGA CTGCAGGGCG TGGCGTTTTT GCAGCGCAAA
AACCGTCCGG CGCAGCCGAC CGCTCAGCAC CGACCGCATC GCTAA
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| Protein sequence | MMERTNLLTS FQEFGLADPI ARALQEENYH TPTPIQAQTI PLALAGRDVV GIAQTGTGKT
ASFALPILHR LLQNRIKPAS KTCRVLVLSP TRELSGQILD SFNAYGRHVH LSAALAIGGV
PMGRQVRSLM GGVDVLVATP GRLLDLVQGN ALKLTQVEFL VLDEADRMLD MGFINDIRKI
VAKLPIKRQT LFFSATMPKD IADLAEQMLR DPARVAVTPV SSTVERINQR VIQLDHSAKP
AALAQILKDD KVNQALVFTR TKHGADKVVK GLARAGITAD AIHGNKSQNY RERVLAAFRT
GELRTLVATD IAARGIDVDG VSHVVNFDLP NIPETYVHRI GRTARAGADG TAISLCAGEE
MAYLRDIEKL IKVSLPKEDR RTPGAHAAPT PPPHRGPRQA PHGHSPRNGD APTRGKNHRR
RGPAAGPARQ SDASRHEAAP RPQHGGNGEG LQGVAFLQRK NRPAQPTAQH RPHR
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