Gene Rpal_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4131 
Symbol 
ID6411815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4424923 
End bp4426188 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content71% 
IMG OID642714013 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001993102 
Protein GI192292497 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACA AGCGCTTACT GACGTTGCTG GCGTCCGCTG CTGTGGTCGC CGCGGGAACC 
TCCGCCGCGC TCGCGCAGAG CTATCCCTCG ACCCCCGGCG CTTATATCGG GCAAGCCGGC
GAGGACCGTC CAGGCCTGCC GAATTTCGAC AGCATCGACG ACGAGGACGC GCCCACGGCG
CGCCAGTCCG CGACGCTGCC GCCGCCCGGT CCGGTAACCT CGCCGGGCGA TCCGCGCTAC
GGCGGTTCGG CCGCGCCGGT CTATTCCAAT GCCGCCCCGC AAGGCCCGGT GATGTCGCCG
GACGATCCGC GCTATGGCCG CCCGATGGGC GCCCCGACCT ATTCCAACGC GGCGCCGGCC
GCCGGCCCGC AGGGGCCGGT GATGTCGCCG GACGATCCGC GTTACGGCCG CCCGACGGGC
GCAACGAGCT ATTCCAACGC GGCACCGGGC GCCGCGCCGC AGGGACCGGT GATGTCGCCG
GATGATCCCC GCTACGGCCG TCCGATGGGG CCGCCGTCGG TGATCTATTC CGATCGCGGT
GACGGTGGCG TGCGTCCGCC GGCTGGTGTC GGCGGCGGCG CGCCGTCGGC TCAGCCCGGC
GCCGATGGCC GGCCGATGCA GGTCTCGGCG TTGCCGCCGG AAGAGCAGCC GGACGCCGAT
CAGACCGTGC AGCTGCCGCC GAACCTGCGC CGGCAGGAGG TCGATTTCGC CACCAAGGAG
CCGGCCGGCA CCATCGTGGT CGATACCGCC AACACTCATT TGTATTACGT GCTCGGCAAC
GGCCGCGCGA TCCGCTACGG CGTCCGTGTC GGTCGTGACG GCTTCACCTG GAACGGCGTG
CAGAAGATCT CCCGCAAGGC GGAGTGGCCG GATTGGCATC CGCCGGCCGA GATGATCGAG
CGCCAGCCCT ATCTGCCGCG CTTCATGGCC GGTGGTCCGG GCAACCCGAT GGGCGCCCGC
GCGATGTATC TCGGCTCGAC CGTGTACCGC ATCCACGGCA CCAACCAGCC GTCGACGATC
GGCAAGTTCG TGTCCTCGGG CTGCATCGGC ATGCTGAACG ACGACGTCAG CGATCTGTTC
GAGCGCGCCA AGGTCGGCAC CCGCGTTGTG GTGCTGCCGG GCTCACCGCC GAAGAACACC
GCCACCGCTC AGGCACAGCC CGCGATGGCG CCGGGTGGGC AATCCCCGGC ATTGCCGCCG
GCTCCGCTGC CGGGCGCACA GCCGACGTCG GTGGCGCCGC TGCCGGCCCC GGTCACGATC
CGCTAA
 
Protein sequence
MMNKRLLTLL ASAAVVAAGT SAALAQSYPS TPGAYIGQAG EDRPGLPNFD SIDDEDAPTA 
RQSATLPPPG PVTSPGDPRY GGSAAPVYSN AAPQGPVMSP DDPRYGRPMG APTYSNAAPA
AGPQGPVMSP DDPRYGRPTG ATSYSNAAPG AAPQGPVMSP DDPRYGRPMG PPSVIYSDRG
DGGVRPPAGV GGGAPSAQPG ADGRPMQVSA LPPEEQPDAD QTVQLPPNLR RQEVDFATKE
PAGTIVVDTA NTHLYYVLGN GRAIRYGVRV GRDGFTWNGV QKISRKAEWP DWHPPAEMIE
RQPYLPRFMA GGPGNPMGAR AMYLGSTVYR IHGTNQPSTI GKFVSSGCIG MLNDDVSDLF
ERAKVGTRVV VLPGSPPKNT ATAQAQPAMA PGGQSPALPP APLPGAQPTS VAPLPAPVTI
R