Gene Rpal_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4112 
Symbol 
ID6411796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4408470 
End bp4409561 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content67% 
IMG OID642713994 
Producthypothetical protein 
Protein accessionYP_001993083 
Protein GI192292478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.427419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCGCA AAGCTTTCAT GAAAGTGTTT TCGGCCCATC CGGTCGAGAC GATTGCCGCC 
TGCACCGGTC TGTTCATGAT CGTGCTCGGT TTTGCGCTCG GCACACAATC GGGCTGGATC
TGGTTCTGGG GTCAGGTGTC GGCGATCTGC GGCGCCAGCC TCGCCACCCT CGCGGTGGTG
TGGACGCTGC GCCAGCGCGC CGCCGAAGCA CGGATGGCCG CCAATCTCAA CGTGCTGGCG
CGCCAGCTCG AGACCTCGAT CAGCCAGATC CACAAATCGG TGAAGGGCGG TCGCGACGAG
TCGATCCCCA CCGCTGTGTA CTTGGCGCAG ATCGAGCAGT GCATCGACAA TCTGATCGGC
GTCACCCACG AGATCGGTGA GATCACCGGC CGGCAACTGC CGTTCGACGT GATCGAGATG
CTGACCGCGC GCGACACCTT GCAGATCGAA GCGCGGATCA CCGACGGCCG CACGCCCGAG
CGCAAGCTGG TCACTGAGAC CGAGAACTGC CCGGCCTGCA AGAAGCAGGT CGAATTCCAG
GTCGGCAGCC TGCCAGGCGA CAGCGCCAAG CCGACCTGCC CGCATTGCGG CCAGCGCTTC
CACGCCCACC GCTCCACCAG CGGCAACATC TTTCTGCGGA TGCCGGGCGC CTCGCAATTC
ACCCGCGCGG TCTCGGTCAA CTGCCCGGTC TGCGCCAGCA AGATCCCGGC GAACATCGAC
CAGGGCAAGC AGCATTCGGA GACGCGCTAT TGCTTCTCCT GCGGCGCCAA GGTGTCGATC
GATCCGCTCG GCCAGCAATG CACGCTGCTC AGCAAGCAGG ACCGCCTGCC CGGCCATCTC
AACGGCGCCG GTACGCTGGT CTGCGACAAG TGCAACGATC CGGTGATCAC GCTGACCTCG
AACAGCGCCG GCACTTACGG CATCTGCCGC AAGGACGACG GCCTGGTGTT CTCATCCGCG
GCCGGCACCA CCTCGCACGC CGCGCCTGCG CCAAGCGCCG CGCCGCAGCC TGCTCCGCCG
TCGGCGCCGC CGCCCTCCGC TGCCAAGCCC GCGCCGAGCG ATACGGTGGC GCGCAGCGAC
GCGGCCGAGT AG
 
Protein sequence
MLRKAFMKVF SAHPVETIAA CTGLFMIVLG FALGTQSGWI WFWGQVSAIC GASLATLAVV 
WTLRQRAAEA RMAANLNVLA RQLETSISQI HKSVKGGRDE SIPTAVYLAQ IEQCIDNLIG
VTHEIGEITG RQLPFDVIEM LTARDTLQIE ARITDGRTPE RKLVTETENC PACKKQVEFQ
VGSLPGDSAK PTCPHCGQRF HAHRSTSGNI FLRMPGASQF TRAVSVNCPV CASKIPANID
QGKQHSETRY CFSCGAKVSI DPLGQQCTLL SKQDRLPGHL NGAGTLVCDK CNDPVITLTS
NSAGTYGICR KDDGLVFSSA AGTTSHAAPA PSAAPQPAPP SAPPPSAAKP APSDTVARSD
AAE