| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4108 |
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| Symbol | |
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| ID | 6411792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4405100 |
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| End bp | 4406392 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713990 |
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| Product | hypothetical protein |
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| Protein accession | YP_001993079 |
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| Protein GI | 192292474 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.645862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA GAGTCATCAT CGCCGGCGGC GGCATTGGCG GGCTTGCGGC GGCGTTGACG
CTGCATCAAA TCGGGGTGCC CTGCGTCGTC TATGAGGCGG CGCGCGAGAT GCGGCCGCTC
GGCGTCGGCA TCAATCTGCA GCCCAACGCG GTGCGCGAAC TGCTCGACCT CGGCATCACC
GAAGCCGATC TCGACGGCGT CGGCCTGCCG GCGAAGGAAT GGGCGCTGGT CGGGCTCAAC
GGCAACGACA TCTATGCCGA GCCGCGCGGC AAGGCCGCCG GCTATCGCTG GCCGCAATAT
GCGGTGCATC GCGGCCGCTT CCACATGTTG CTGAACGAGA AGGTGATCGA GCGGCTCGGC
GCCGACGCCG TGCAGCTCGG CCGCCGCGTC ACCTCCTATC GCAAGACCGC CGACGGCGTC
ACCGCGACGC TGGAGCATGC CGATGGCGGC ACATCGGAGG TGAGCGGCGC GCTGCTAATC
GGCGCCGACG GCATTCACTC CGCGGTGCGG GCGCAGATGC ATCCGAACCA GCCGCCGATT
CATTGGGGCG GCGCGGTGAT GTGGCGCGGC ACCACCTGGG GCAAGCCGAC CCGCAGCGGC
GCCTCGTTCA TCGGGCTTGG TACGCATCGC CACCGCGTGG TGATCTACCC GATCTCGCAT
CCGGATCCCG CGACCGGGCT GTCAATGCTG AACTGGATCG CCGAAGTCAC GCTCGACAAT
GCCGACGGCT GGAAGCAGCA GGGCTGGTTC AGGCAGGTGC CGACGTCCGA ATTCGCGCAT
CATTTCGACG GCTGGGTGTG GGACTGGCTC GACGTGCCGG CGATGATCCG CGAAGCCGAC
TCCGCTTACG AGAATCCGAT GATCGACCGC GATCCGGTCA GCACTTGGCG CGACGGCCCG
GTGGTGCTGA TCGGCGACGC CGCGCATGCG ATGTATCCGA CCGGTTCGAA CGGCGGCACC
CAGGCGATCG TCGACGCGCG CGAACTCGGC GCCGCGATGG TCGCGCATGG CGCCACCGAA
GCGGCGCTGG CGGCGTTCGA CGCCAAGCTG TGCGGGCCGA TCTCGCAGCT GATCCTGCGC
AATCGCGGCG CCGGTCCGTT CGGTCTGCTC AACCTGGTCG ACGAACGCTG CGGCGGCACC
TTCGACAACA TTGACGACGT GATCCCGCCG GCCGAGCGCG CCGCCTTCAT GGCCGGCTAC
AAGGCCGCCG CCGGCTTCGC TATCGATCAC CTCAACGCCG CGCCGCCGAC GATTGCGCCC
GGCGCGCGGG TAAAGGAGGC GGCCGCGGCG TGA
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| Protein sequence | MSDRVIIAGG GIGGLAAALT LHQIGVPCVV YEAAREMRPL GVGINLQPNA VRELLDLGIT
EADLDGVGLP AKEWALVGLN GNDIYAEPRG KAAGYRWPQY AVHRGRFHML LNEKVIERLG
ADAVQLGRRV TSYRKTADGV TATLEHADGG TSEVSGALLI GADGIHSAVR AQMHPNQPPI
HWGGAVMWRG TTWGKPTRSG ASFIGLGTHR HRVVIYPISH PDPATGLSML NWIAEVTLDN
ADGWKQQGWF RQVPTSEFAH HFDGWVWDWL DVPAMIREAD SAYENPMIDR DPVSTWRDGP
VVLIGDAAHA MYPTGSNGGT QAIVDARELG AAMVAHGATE AALAAFDAKL CGPISQLILR
NRGAGPFGLL NLVDERCGGT FDNIDDVIPP AERAAFMAGY KAAAGFAIDH LNAAPPTIAP
GARVKEAAAA
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