Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4083 |
Symbol | tnaA |
ID | 6411767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4381010 |
End bp | 4382458 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642713965 |
Product | tryptophanase |
Protein accession | YP_001993054 |
Protein GI | 192292449 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3033] Tryptophanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.450224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAG TGAAGTTTTT CGGCAACGAG GCGGTGCCGC TCGAGATGCA CAAGGTGCGG ATCGTACAGA AACTCAACCT GCCGCCGGTC GAGCGTCGCC TGGAGAAGAT CACCGAGGCG GGCAACAACA CCTTCCTGCT GAAGAACGAC GACGTCTTCC TCGACATGCT GACCGACAGT GGCGTCAACG CGATGAGTGA CCGCCAGCAG GCCGCGATGC TGACCGCCGA CGACTCCTAC GCCGGCAGCG CCACCTACAC CCGGCTCGAA GACAAGCTGC GCGACATCTT CGGCATGCAC TACTTCCTGC CGACCCATCA GGGCCGTGCC TGCGAGCACA TCCTCGCGAA GGTGTTCGTC ACGCCCGGCA AGGTGGTGCC GATGAACTAT CACTTCACCA CCACCAAGGC GCACATCGTG CTGCAGGGCG GCACGGTGGA GGAACTGGTG ACCGACGCCG GCCTCGAAGT GACCAGCGCC AACCCGTTCA AGGGCAACAT GGACATCGCC AAGCTGCGCG CGGTGATCGA GAAGGTCGGC GCCGCCAATG TCGGCTTCGT GCGGATGGAG AGCGGCACCA ACCTGATCGG CGGCCAGCCG GTGTCGCTGC AGAACCTTGC CGACGTCAGC AACGTCTGCA AGGAGCACGG CGTTCCGCTG GTGCTCGACG CCAGCCTGCT CGCCGACAAT TTGTACTTCA ACAAGACCCG CGAAGATCAC TGCAAGACGC TGTCGATCCG CGAGATCACC CGCCGCACCG CCGATCTCTG CGACATCATC TACTTCTCGG CGCGCAAGCT CGGCTGCGCC CGCGGCGGCG GCATCTGCAT CCGCGACCGC GCGCTGTACG AGAAGATGCG GCCGCTGGTG CCGCTATATG AAGGCTTCCT CACCTATGGC GGCATGTCGG TGCGCGAAAT GGAAGCGCTC ACCGTCGGCC TCGAAGAGAC CATGGACGAG GAGATGATCA ACCAGGGGCC GCAGTTCATC GCCTATATGG TCGAGCAACT GGTCGAGCGC GGCGTTCCGG TGATCACCCC GGCCGGCGGC CTCGGCTGCC ACATCGATGC CAAGCGCTTC GTCGATCACA TCCCGCAGTC GCAATATCCG GCCGGCGCGC TTGCGGCGGC GCTGTACGTC GCCTCCGGCA TCCGCGGCAT GGAGCGCGGC ACGCTGTCCG AACAGCGCGA GCCCGACGGC AGCGAGATCT ACGCCAATAT GGAACTGGTG CGCCTCGCCA TGCCGCGCCG GGTGTTCACG CTGTCGCAGG TCAAATACGC AGTCGACCGC ATTGCCTGGT TGTACACCAA CCGCAAGCTG ATCGAGGGCC TGACCTTCGT CGAGGAGCCG GAAGTGCTGC GGTTCTTCTA CGGCCTGCTC AAGCCGGTGA CCGACTGGCA GAACAAGCTG GTGGCGAAAT TCCGCGAGGA TTTCGGCGAC AGCCTGTAA
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Protein sequence | MATVKFFGNE AVPLEMHKVR IVQKLNLPPV ERRLEKITEA GNNTFLLKND DVFLDMLTDS GVNAMSDRQQ AAMLTADDSY AGSATYTRLE DKLRDIFGMH YFLPTHQGRA CEHILAKVFV TPGKVVPMNY HFTTTKAHIV LQGGTVEELV TDAGLEVTSA NPFKGNMDIA KLRAVIEKVG AANVGFVRME SGTNLIGGQP VSLQNLADVS NVCKEHGVPL VLDASLLADN LYFNKTREDH CKTLSIREIT RRTADLCDII YFSARKLGCA RGGGICIRDR ALYEKMRPLV PLYEGFLTYG GMSVREMEAL TVGLEETMDE EMINQGPQFI AYMVEQLVER GVPVITPAGG LGCHIDAKRF VDHIPQSQYP AGALAAALYV ASGIRGMERG TLSEQREPDG SEIYANMELV RLAMPRRVFT LSQVKYAVDR IAWLYTNRKL IEGLTFVEEP EVLRFFYGLL KPVTDWQNKL VAKFREDFGD SL
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