| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4074 |
|---|
| Symbol | |
|---|
| ID | 6411758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4375319 |
|---|
| End bp | 4375675 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642713956 |
|---|
| Product | transcriptional regulator, ArsR family |
|---|
| Protein accession | YP_001993045 |
|---|
| Protein GI | 192292440 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4189] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00570943 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCAA GTGCAGCCCT CGATGCTCTG TCGGCCCTGT CGCAGGAAAC CCGCCTCGCG
GTGTTCCGGC TGCTGGTCCG GCGCGAGCCG GACGGCGTCG CCGCCGGCGA CCTCGCCAAA
GCGGTGGGAG TGCCGGCCAA CACCATGTCG GTGCATCTCG GCGTGCTGAG TCGCGCCGGC
CTGGTGACCT CGGAGCGGCA CAGCCGCTCG ATCGTGTACC GCGCCGATCT GGCGCGGTTC
CGAGATCTGA TGCTGTTCAT GCTGATGGAT TGCTGCGACG GCCGCAGCGA TATCTGCGCC
CCGCTGATCG CCGACCTGAC CCCCTGTTGT CCTTCGAAAG AGACCGTCGA TGTCTGA
|
|---|
| Protein sequence | MESSAALDAL SALSQETRLA VFRLLVRREP DGVAAGDLAK AVGVPANTMS VHLGVLSRAG
LVTSERHSRS IVYRADLARF RDLMLFMLMD CCDGRSDICA PLIADLTPCC PSKETVDV
|
|---|
| |