| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3997 |
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| Symbol | |
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| ID | 6411679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4283460 |
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| End bp | 4285205 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642713879 |
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| Product | integrase family protein |
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| Protein accession | YP_001992968 |
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| Protein GI | 192292363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTG CAACCAATAT TAGCCGCCGG CCCGGTAGCC GGAATTATTA TGTTCGGATG
GCCGTGCCGC GCGATCTCCA GGTGCGCATG GGCACGCCCG GAAAGCCCCG TAGAGAGCTT
CGCAAGTCGC TGAATACGCC GGACGCGCGG GAGGCCAAAC GCCTCTCACG GCCAATTCTG
GACGAATGGG AGCGCACATT TGCCGAGCTG CGGCGCCCCA AGCAGTTGAC GGAAGCCGAG
CTGCAGAACG CGATCTGGCG CCGATACCTT GAGCTGATCA ACGCCGACGA GAGGTTCCGG
CAAGAGCTGC CGACCGGCGA CGAACTGAAT GCGATCTGGG AATATCTGGA AGCCGAGTTC
GGCGAGCTGA ACATCACGGC CTACAGGATC TTCGAAGAGC TGCGGGACCG GTTCGAAAGC
AACCAGCGGG AGCGAGTCGA GCGGCTGGCG CAGATGAAGG TAGAAGCCGC CCGCGGCGAA
ACGAAGCTGA TCGCGGACGT GGTCGAGCAA GTCATCGAAG CCCGGCGGCT TGGGGTCGAT
CCGGGAACGC CCGAATACCG CAAGCTGGCC CAAGGGCTCC AACGTGCCGA GCTGGAAGGG
CTTAAGCGGA CGGTTGAGCG GGACGCTGGC GACTTCTCCG GCGAGTCCAA AGACAAGCTG
GTGCAGCAGC CGACCGTATT CGATCCGCCG AAGGGCGAGG GCATCCTAGA GCTTTACGAT
CGCTATGCGC GGGAGAAGTC GGGCAGGGTG TCGGCCGACA CTTGGGCGCA GAACCGGAAG
GTGGTGGCGC TCTTTGACAA CTTCGTTGGA GGCAACGCGC ACATTTCAGC GCTGACTCGG
AAGAACGTCC GGGAGTGGAA AGAGAAGTTG TTCGAATGGC CGGTGAAGGC GATCGAAGCA
AGCGAGTTCC GCGGGCTGTC GTTCCTCGAC ACGATCGAAC GCAACAAGGT CGTCGGCAAG
CCGGTGATCC AGCACAAGAC GATCAACCGA TATCTGGCTG CATTGGGCGG TTTCAGCGAC
TGGTTGCTGG CGAACGACTT TATCGGCGAG CAGATCATGC AGGGCATGTA TCTGGAAGTC
GATCGCCGGA AAAAGACGGT GCTGCCCTAC AGCGCCGATC AGATGCGCCG CATCTTCGAA
TCGCCTCTCT TCCACCGCTG CGGTGGTGAT AAGCTGGAGC ACCAGAAGGG CAACGTTGAA
GTCCGGGATT GGCGCTACTG GATACCTCTG ATCGCCGTCC ACTCCGGTGC CCGGCTCGGC
GAGATTTGCC AGTTGATGAC GGCCGACGTT CGGCAGCTTC ACGACGTCTG GATTTTCCAC
ATTACCGAGG AAGGCGGGGC GGGCACGAAG TCGACCAAGA CCGAAGGTTC GATGCGGGTG
GTGCCGATGC ATTCGAAGCT GATCGAACTT GGTTTCTTGA AATACCATGC CCGCATGTCG
GCGATGGGCG ACCGGTTGTT CCCTGAGATC AAGGCGGATG CGCGCGGCTA CATAAGCGGC
AAGGCGTCAA CGTTCTTCAA TGATTACTTC CGTGCGATCG GCGTGAAGTC TGACCGCTCT
TTGAATTTCC ACAGCTTCCG GCATGGCTTT GCAGACGCGC TGCGGCGGGC TGGCTACTAT
GACGAACAGT TTGGGCCGCT ACTTGGGCAT ACGAAATCGA CCACGACGGG GCGCTATGGC
ATCGAATCTG AAATGGTGAT CGCAGATCGT GTCAAGATGG TCGAAGCGGT CATCCAAGCA
AAGTGA
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| Protein sequence | MAIATNISRR PGSRNYYVRM AVPRDLQVRM GTPGKPRREL RKSLNTPDAR EAKRLSRPIL
DEWERTFAEL RRPKQLTEAE LQNAIWRRYL ELINADERFR QELPTGDELN AIWEYLEAEF
GELNITAYRI FEELRDRFES NQRERVERLA QMKVEAARGE TKLIADVVEQ VIEARRLGVD
PGTPEYRKLA QGLQRAELEG LKRTVERDAG DFSGESKDKL VQQPTVFDPP KGEGILELYD
RYAREKSGRV SADTWAQNRK VVALFDNFVG GNAHISALTR KNVREWKEKL FEWPVKAIEA
SEFRGLSFLD TIERNKVVGK PVIQHKTINR YLAALGGFSD WLLANDFIGE QIMQGMYLEV
DRRKKTVLPY SADQMRRIFE SPLFHRCGGD KLEHQKGNVE VRDWRYWIPL IAVHSGARLG
EICQLMTADV RQLHDVWIFH ITEEGGAGTK STKTEGSMRV VPMHSKLIEL GFLKYHARMS
AMGDRLFPEI KADARGYISG KASTFFNDYF RAIGVKSDRS LNFHSFRHGF ADALRRAGYY
DEQFGPLLGH TKSTTTGRYG IESEMVIADR VKMVEAVIQA K
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