| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3989 |
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| Symbol | |
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| ID | 6411671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4275486 |
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| End bp | 4277108 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713871 |
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| Product | Terminase |
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| Protein accession | YP_001992960 |
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| Protein GI | 192292355 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC GCTCAACGTA TCCTGATTGG CTGTTCGACG GCTCACCGAT CGACGACCCG
CTCGGCTATG GCGAGCGCGC CGTCAATTTC CTGCGCCTAC TCAAGCACCC CAAAAGTGCG
GCGCCTAAGC GCGCGCTGAT GCTGGACGAA TGGCAGGACC GGATCGTCCG CCGCATCTAT
GGTCCGCGGG ACCAGAACGG CCACCGGATT GTCAAGACGG TGGTCCTGCT ACTCCCGCGC
GGCAACCGTA AGACGTCGTT GGCGGCGGCG CTTTCGCTTC TGCACACCAT CGGCCCGGAA
CGACGGCCCG GCGGCGAGGC AATCTTCGCA GCGGGCGACC GGCCGCAAGC AAGCCTCGGT
TTCAAAGAGG CCGCCGGCAT CATTCGGGAA GACAAGCGAC TGGTGAAAGC CACGCGTATC
TATGACGCTC ACAACAGCGT CAAGAAAATC GTCTTCAACA AGGATGGCTC TTTCCTCGAA
GCCATCAGCG GCGAAGGAGC GCCGGCCCAC GGCCGCACCC CAGCCTTCGC CTTCGTTGAC
GAACTGCACA TTTGGAAGAA CGCGGACCTC TGGACCGCGA TCAAGTCGGG CCTGCCCAAG
ACCCAAGGCT CTCTGCTGAT CATCGCGACC ACTGCCGGCC GCGGTCAGGA CAACATCGCT
CACGAGATCG TCGACCGCGC CCGCAAGGTT GCGCGCGGCG ACATCGATGA TCCGTCGTTG
CTTCCGATCC TGTTCGAAAC GCCCGATGAT GCCGATTGGA GAGACGAAGC CCTTTGGCAC
CGCGCAAATC CTGGCCTTGC ACTCGGCTAT CAGGACATTG AGGGACTGCG CCAGCTCGCG
CGCGAGGGTG AAACCAGCAT CACTGCCCGT GAGACATTCC GGCAATACAA TCTGAATGTC
TGGCTCGACC GCTCAACTGA CCCGTTCGTG GAGATGGCGG TCTATGATCA GGGCGCAGAC
CCGGTCGACC TTGAGGCGCT GAAGGGGCGC CCGTGTTGGC TCGGTGTCGA TCTCTCGTCA
CAAACCGACC TCACCGTGAT CGTTGCCGCG TGGCGCGATG ACGATGGCGG GTTCACCGTT
CTGCCCATTT TCTTCTGTCC GAAGATGAAC CTTCGCGAGC GGGAAGAGCA AACCGGTGCC
CCATATCTCG AATGGGAACG ACAAGGGCTG ATCACCGCGA CCGACGGCAA CGTGGTGGAC
TTTGATGCGG TGGAAGCCGC TATTCGCGAC CTCTGCGATC GCTTCGAAGT CACGGAGATT
GCGTTCGATC CTGCTCTTGC GCGAAGCGTG CTCAACAGCT TGCAGAAAGA CGGCTATCCA
GCGGTGGAAA TGCGCCAGGG TGCGCTCACC ATGATGCCCG CCATCGCCGA GCTTGAACGC
GCGATCGTTG CCGGCAAGTT TCGGCACGGT GGCAACCCCG TGCTACGGTT CAACTTCGCC
AATGTCGAGG TAGAGCGGAA CAAGCAACAG CACGCCGTTC GGTTCGTCAA ATCCAAGAGG
TGGTTGAGTA TCGACGGTGC GGTTGCGGCG GCGATGGCAG TCTCGCGCGC CGCGGCCGGC
GAGAGCGGCC GGTCCCTTTA CGACGATCCG GCCCTCAAAC CCGAAGATTT CGTGTGGAGC
TGA
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| Protein sequence | MTTRSTYPDW LFDGSPIDDP LGYGERAVNF LRLLKHPKSA APKRALMLDE WQDRIVRRIY
GPRDQNGHRI VKTVVLLLPR GNRKTSLAAA LSLLHTIGPE RRPGGEAIFA AGDRPQASLG
FKEAAGIIRE DKRLVKATRI YDAHNSVKKI VFNKDGSFLE AISGEGAPAH GRTPAFAFVD
ELHIWKNADL WTAIKSGLPK TQGSLLIIAT TAGRGQDNIA HEIVDRARKV ARGDIDDPSL
LPILFETPDD ADWRDEALWH RANPGLALGY QDIEGLRQLA REGETSITAR ETFRQYNLNV
WLDRSTDPFV EMAVYDQGAD PVDLEALKGR PCWLGVDLSS QTDLTVIVAA WRDDDGGFTV
LPIFFCPKMN LREREEQTGA PYLEWERQGL ITATDGNVVD FDAVEAAIRD LCDRFEVTEI
AFDPALARSV LNSLQKDGYP AVEMRQGALT MMPAIAELER AIVAGKFRHG GNPVLRFNFA
NVEVERNKQQ HAVRFVKSKR WLSIDGAVAA AMAVSRAAAG ESGRSLYDDP ALKPEDFVWS
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