| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3960 |
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| Symbol | |
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| ID | 6411641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4249865 |
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| End bp | 4251190 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713841 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001992931 |
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| Protein GI | 192292326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACT TTACCCTCGA TCGCCGCACG TTGTTGAAGG GTGGCGCGAT CACGTTGGCC
ACGGCAGCGA CGATGTCCGC CGAGCAGTTG CTTGGTTACG CCAAGGCCTG GGCGCAGGCC
TCGCCGTGGA AGCCCGAACC GGGCGCCAAG ATCAATCTGT TGCGCTGGAA GCGGTTCGTC
GAAGCCGAAG ACGTCGCCTT CATGAAGATC GTCGATGCCT TCCAGAAGGC CAACAACGTC
ACCATCAACG TCTCCAACGA GTCCTACGAC GACATCCAGC CGAAGGCGTC GGTGGCTGCC
AACACCGGGC AGGGGCTCGA CATGGTGTGG GGCCTGTACT CGCTGCCGTT CCTGTTCCCG
AACAAATGTA CCGACGTCAG CGACGTCGCC GATTATCTCG CCAAGAAGTG CGGCGGCTGG
AGCGACTCCG GCAAGGCCTA CGGCATGTAT AACGGCAAGT GGATCGGCAT TCCGGTGGCG
GCTACCGGCG GCCTCGTCAA CTACCGGATC AGCGCGGCCG AGAAGGCCGG CCACAAGGAG
TTTCCGAAGG ATCTCGGCGG CTTCTCCGAT CTGGTGAAGG GCCTGAACAA GAACGGCACG
CCGGCCGGCA TGGCGCTGGG CCACGCCTCG GGCGACGCCA ACGGCTGGCT GCACTGGGCG
CTGTGGGCGC ACGGCGGCGC GCTGATCGAC AAGGACAGCA AGGTCGTCGT CAACTCACCA
GAGACCGCCA AGGCGCTCGA ATACGTCAAG GGGCTGTACG AGAACTTCAT TCCCGGCACC
GCGTCGTGGA ACGATGCTTC CAACAACAAG GCGTTTCTCG CCGGCCAGCT TTATCTGACC
ACCAACGGCA TCTCGATCTA CGTCACGGCG AAGAAAGACA ACAAGGAGAT GGCGGCGGAT
ATCAACCACG CGCATCTGCC CGCCGGCCTC AACGGCAAGA CCCGCGAGCT GCATCTCGGC
TTCCCGATCC TGATCTACAA CTTCACCAAG TTCCCCCAGA CCTGCAAGGC ATTCACCGCT
TTCATGATGG AGCCGGAGCA GTTCAACCCG TGGGTCGAGG CCGCGCAGGG CTATCTGTCA
CCGTTCCTAC TCGACTACGA GAAGAACCCG ATGTGGACCG CGGACCCGAA AAACACGCCG
TATCGCGACG TCGCCCGCAC CGCCTCGACG CCGGCCGGCG ATGCCCAGAT GGGCGAGAAC
GCCGCCGCGG CGATCGCCGA CTTCGTCGTG GTCGACATGT TCGCCAACTA CTGCACCGGC
CGCGAAGACG TGAAGACCGC CATGAGCAGC GCCGAACGCG CGGCGAAGCG GATCTTCCGG
GCGTAA
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| Protein sequence | MTDFTLDRRT LLKGGAITLA TAATMSAEQL LGYAKAWAQA SPWKPEPGAK INLLRWKRFV
EAEDVAFMKI VDAFQKANNV TINVSNESYD DIQPKASVAA NTGQGLDMVW GLYSLPFLFP
NKCTDVSDVA DYLAKKCGGW SDSGKAYGMY NGKWIGIPVA ATGGLVNYRI SAAEKAGHKE
FPKDLGGFSD LVKGLNKNGT PAGMALGHAS GDANGWLHWA LWAHGGALID KDSKVVVNSP
ETAKALEYVK GLYENFIPGT ASWNDASNNK AFLAGQLYLT TNGISIYVTA KKDNKEMAAD
INHAHLPAGL NGKTRELHLG FPILIYNFTK FPQTCKAFTA FMMEPEQFNP WVEAAQGYLS
PFLLDYEKNP MWTADPKNTP YRDVARTAST PAGDAQMGEN AAAAIADFVV VDMFANYCTG
REDVKTAMSS AERAAKRIFR A
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