Gene Rpal_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3906 
Symbol 
ID6411586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4193646 
End bp4194314 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content54% 
IMG OID642713788 
Producthypothetical protein 
Protein accessionYP_001992879 
Protein GI192292274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCGCCT CGAACGACGA CGCTGAACTC ACTGCAATCC GAGAGCAATG CTCGAAAACC 
GGAAATTTTT CTTGGACGTC GCGCAAATAT CAAGACGACA TCCTGAGGTT CATTCGCAGC
AATAGCCAAT CCGGCAACTG CGTCATTGAA GTCGGGTGCT ACAAAGGAGG ACTAACGGCG
CTTCTGGCAG CAACGTGCAG GAATCTGAAC CTGCGCCTCT ATTCGATGGA CATTTCCGCC
GACGCAGTTT CGACTACGAA GACCCTGCTG AAGAATTTGA ACCTGACAAA ACATGCGGCA
GTTGAGCAAT CGACGTTCCC CGAGTTTGTG AGCAAGACTT CCTTCTTTCG TCGCTTCTCA
GGTCGCGCGG TCCTCTGCAT CCTGGATGGT GATCATTCCT ACAATGCCGT GTTGGCTGAC
ATCAAAGCTG CGGAAGCTCT ACGTTCACAA CCGTATGCTC TCGCCTTCCA TGATTACAGT
CTTCGGCATC CGACAACCGA TGAGCGCGTT AGTGACGCGA TCGACGACCA TTTCGGAGCC
TCGAAAACGC GAACTCTGAT CGGCCAGGAG ATGAATGGAG TTGGCCACGC GACCAAGGCT
GCGCCGCAGG AAGACGGTCA TTGGTGGGGC GTTCCCGGTT CAGAAGGCGC AATCCTGACG
TTGCGCTGA
 
Protein sequence
MIASNDDAEL TAIREQCSKT GNFSWTSRKY QDDILRFIRS NSQSGNCVIE VGCYKGGLTA 
LLAATCRNLN LRLYSMDISA DAVSTTKTLL KNLNLTKHAA VEQSTFPEFV SKTSFFRRFS
GRAVLCILDG DHSYNAVLAD IKAAEALRSQ PYALAFHDYS LRHPTTDERV SDAIDDHFGA
SKTRTLIGQE MNGVGHATKA APQEDGHWWG VPGSEGAILT LR