Gene Rpal_3906 details

Gene Information

• Locus tag: Rpal_3906
• ID: 6411586
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 4193646
• End bp: 4194314
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642713788
• Product: hypothetical protein
• Protein accession: YP_001992879
• Protein GI: 192292274

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATCGCCT CGAACGACGA CGCTGAACTC ACTGCAATCC GAGAGCAATG CTCGAAAACC 
GGAAATTTTT CTTGGACGTC GCGCAAATAT CAAGACGACA TCCTGAGGTT CATTCGCAGC 
AATAGCCAAT CCGGCAACTG CGTCATTGAA GTCGGGTGCT ACAAAGGAGG ACTAACGGCG 
CTTCTGGCAG CAACGTGCAG GAATCTGAAC CTGCGCCTCT ATTCGATGGA CATTTCCGCC 
GACGCAGTTT CGACTACGAA GACCCTGCTG AAGAATTTGA ACCTGACAAA ACATGCGGCA 
GTTGAGCAAT CGACGTTCCC CGAGTTTGTG AGCAAGACTT CCTTCTTTCG TCGCTTCTCA 
GGTCGCGCGG TCCTCTGCAT CCTGGATGGT GATCATTCCT ACAATGCCGT GTTGGCTGAC 
ATCAAAGCTG CGGAAGCTCT ACGTTCACAA CCGTATGCTC TCGCCTTCCA TGATTACAGT 
CTTCGGCATC CGACAACCGA TGAGCGCGTT AGTGACGCGA TCGACGACCA TTTCGGAGCC 
TCGAAAACGC GAACTCTGAT CGGCCAGGAG ATGAATGGAG TTGGCCACGC GACCAAGGCT 
GCGCCGCAGG AAGACGGTCA TTGGTGGGGC GTTCCCGGTT CAGAAGGCGC AATCCTGACG 
TTGCGCTGA 

 

Protein sequence

MIASNDDAEL TAIREQCSKT GNFSWTSRKY QDDILRFIRS NSQSGNCVIE VGCYKGGLTA 
LLAATCRNLN LRLYSMDISA DAVSTTKTLL KNLNLTKHAA VEQSTFPEFV SKTSFFRRFS 
GRAVLCILDG DHSYNAVLAD IKAAEALRSQ PYALAFHDYS LRHPTTDERV SDAIDDHFGA 
SKTRTLIGQE MNGVGHATKA APQEDGHWWG VPGSEGAILT LR