Gene Rpal_3901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3901 
Symbol 
ID6411581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp4188314 
End bp4188925 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID642713783 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001992874 
Protein GI192292269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGTTGC AGAACCCCAA AAGCCAGCCG GCGACGCTCG AGCGTCGTCG TTTTCAGCGG 
GTGAAAGTTC ACCTGCTCGG ACGCTACATG TTGCCGGATC GCCGCGAATT TCCCTGCCAG 
GTGATCAACA TGTCGCCCGG CGGCTTGGCG CTGCTGGCGC CGGGGATCGG CAACGTCGGG 
GATCGTGTGA TCGCCTATCT CGACCATGTC GGCCGCGTCG AGGGCAAGAT TACTCGTATC 
ATCGACAACG GCTTTGCGAT GACTGTGGCG GCAACGCCGC GCAAGCGCGA CAAGCTCGCG 
GCCCAGCTCA CCTGGCTCGC CAATCGCGAC ATCCTCAATC TGCCGGAAGA TCGCCGCCAC 
GACCGTATCG TGCCGCGCAA CCCGATCGCT GTGCTGACGC TCGACGACGG CAGCCGCATG 
AGCTGCCGCA TCATCGACAT GTCACGCTCC GGCGCCGCGA TCGCCGCGGA ACAGCGCCCG 
CCGCTGAACG CGCAGGTGCT ACTTGGCCGC GTCGCCTCCC GCGTCGTTCG CCACCTCGAC 
GATGGCTTCG CGCTGGAGTT CGTGCACGAG CAGCTCGAAG AAACGCTCGA AGACAGCGTT 
ACCGCGCGGT GA
 
Protein sequence
MLLQNPKSQP ATLERRRFQR VKVHLLGRYM LPDRREFPCQ VINMSPGGLA LLAPGIGNVG 
DRVIAYLDHV GRVEGKITRI IDNGFAMTVA ATPRKRDKLA AQLTWLANRD ILNLPEDRRH 
DRIVPRNPIA VLTLDDGSRM SCRIIDMSRS GAAIAAEQRP PLNAQVLLGR VASRVVRHLD 
DGFALEFVHE QLEETLEDSV TAR